KEGG   Brassica rapa (field mustard): 103861645
Entry
103861645         CDS       T03449                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K14411  RNA-binding protein Musashi
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103861645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103861645
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103861645
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 SET1_RBD
Other DBs
NCBI-GeneID: 103861645
NCBI-ProteinID: XP_009137608
Position
A03:27587631..27590385
AA seq 462 aa
MEQKMESVSDLGKLFIGGISWDTDEERLREYFSKYGDLVESVIMRDRTTGRARGFGFIVF
ADPSVAERVILEKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISSSPSQHGGGSNRTK
KIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK
TFHELNGKMVEVKRAVPKEPSSSSALPLAANRSPLLGGYGGNNYGVVVPNRPSGNNSYFN
SFAPGYNSNNIGRFSPIGSGRNAFSSNFGLGLNQELSLNSSFDGNATLGYNNRIPGNQYF
NNASPNRYNNSPIGFNRGDSAYNPSNRDLLWGNRTDSSGPGWNLGVSVGNNRGNWGLSDA
NGYGRSFGTSSGLSALPFSGSNNNNNNTNGFDGSIGEMYRGNSVYSDSTWQQAMPHQSAN
ELDGLSRSYGFGFDNVASDPSGNASEGYPRSYSVGGNRGIEA
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggagcaaaagatggaatctgtatcggatctggggaagctcttcatcggcgggatctca
tgggacacagacgaagaacggcttcgagagtattttagcaagtacggtgatttggtcgag
tccgtgatcatgcgtgaccgtaccacgggacgtgcacgtggctttggcttcatcgtcttt
gcagatccttctgttgcagagcgagtcatcttggagaaacacatcatcgatggccgcacg
gtggaggcgaagaaagctgtgccacgtgacgaccagcaagtgctgaaacgccacgcgagt
ccaatgcaccttatctcctcctcacctagccaacacggtggtggcagcaatcgaaccaag
aagatcttcgttggaggtttaccgtctagcatcaccgaagccgagttcaagaactacttt
gatcagttcggtacgatcgcagacgttgtggtgatgtatgatcacaacacgcagaggcca
cgtggctttggattcatcacttttgattcagaggagtctgttgacatggttcttcacaag
acgttccacgagctaaacggcaaaatggttgaggtcaaaagagcagtgccgaaggagcct
tcttcctcctcggctcttcctcttgctgctaaccgaagccctcttcttggtgggtatggt
ggtaacaactatggagtagtagtacctaataggccatctggtaataatagctacttcaat
agctttgctcctggttataatagtaacaacataggtcggtttagtcctattggtagcggg
aggaatgctttctctagtaactttggtcttggtttgaatcaagaactgagtttgaactct
agctttgatggaaacgctactcttgggtataataaccgtatccctgggaaccaatacttc
aataatgcttcaccaaaccgttacaacaactctccaataggattcaacagaggcgactct
gcttacaacccaagcaatagagacttgctgtggggaaacagaactgattcttctggtcct
ggttggaacttgggtgtctctgttggtaacaatagaggaaactggggactttcggatgct
aatggctatgggagaagctttgggacaagttctggactttctgcgttaccattctctggt
agtaacaacaacaacaacaatacaaacggttttgatgggtctataggggaaatgtacaga
gggaactcggtttatagcgactcaacgtggcagcaggcgatgcctcatcagtctgctaat
gagttagacggcttgtctcgctcttatgggtttggttttgacaatgtagcatcagaccca
tctggtaacgcctctgaaggttacccaagaagctacagtgtcggaggaaatagaggtatt
gaagcataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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