KEGG   Brassica rapa (field mustard): 103862772
Entry
103862772         CDS       T03449                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2 isoform X1
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103862772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:brp03041]
    103862772
   03032 DNA replication proteins [BR:brp03032]
    103862772
Spliceosome [BR:brp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    103862772
  U2 snRNP components
    103862772
 Complex B
  U1 snRNP components
    103862772
  U4/U6.U5 tri-snRNP components
    103862772
 Complex C
  U2 snRNP components
    103862772
DNA replication proteins [BR:brp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     103862772
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 103862772
NCBI-ProteinID: XP_009138712
Position
A04:391710..392741
AA seq 110 aa
MSRPMEEDTTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCN
MVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK
NT seq 333 nt   +upstreamnt  +downstreamnt
atgagtaggccaatggaagaggataccaccaaccagggaaaaacggaagaggaggagttc
aacacgggacccctttctgttctgatgatgagtgttaagaacaacactcaggtgttgatc
aattgccgcaacaacaggaaacttctcggccgtgttagagcttttgacaggcactgcaac
atggttctcgaaaacgtcagagaaatgtggactgaggttcctaaaactggaaaaggaaag
aagaaggctcttcccgtcaacagagatcgcttcatcagcaagatgtttctccgtggggac
tctgtcattatcgtcctcaggaatcccaagtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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