KEGG   Brassica rapa (field mustard): 103864694
Entry
103864694         CDS       T03449                                 
Name
(RefSeq) nuclear poly(A) polymerase 2 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103864694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103864694
Enzymes [BR:brp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     103864694
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     103864694
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 103864694
NCBI-ProteinID: XP_009140702
Position
A4
AA seq 762 aa
MVGTQALKSYGITKPLSVSGPSAADLKRNLELEKFLVDEGLYESKEETMRREEVLGRIDQ
IVKEWVKELTHQRGYSDQMMEDANALIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF
FIILRDILAEMEEVTDLQPVTDAHVPVMKFKFQGISIDLLYASISLLVVPQDLDISNSSV
LSDVDEQTVRSLNGCRVADQILKLVPNFEHFRTTLRCMKYWAKRRGVYSNVTGFLGGVNW
ALLVARLCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGIPVWDPRKYHRDR
YHLMPIITPAYPCMNSSYNVSQSTLRVMMEQFQYGNKICQEIELNKQHWSSLFEQYMFFE
AYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQF
RHCAFFMGLQRAEGYGGQECQQFDIRGTVDEFRQDVNMYMFWRPGMDVFVSHVRRRQLPP
FVFPNGYKRFRQPKLQNQQGGEPGEPVESLSANVERHAKRKNDNELMDTRPEKPEKRASV
SPPSVDVVSPESSAITTGGTPPIGIVSGPRTECLVTSDIGCSIPNDLNSGSKQNVEVDNR
SLVQGCRDLAEPVGKDARPDPSVVVTCEGGQNKEKGRVVDSASINDTDKQRLPRRPNLKE
DVDRVERESMLGEIADGVLQNGLCRRSLDHEGFLAAASLDSSGEHRNLHSDGLLKSGLSE
ELQTNNLLMGMGRPEDGARSESLQNSLMRHVLLQPIVNLCKS
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggtgggaactcaagctcttaaaagctatggaatcacgaagccgctctctgtttctggt
ccttccgcggctgatttgaagcgtaatttggagctggagaagtttctggttgatgagggg
ctgtacgagagcaaggaggaaaccatgcggagagaggaagttcttggacgcattgatcag
attgtaaaagagtgggtgaaagagttaactcatcagaggggatattcagatcagatgatg
gaggacgctaacgctctcattttcacttttggatcttaccgccttggagtgcacggacct
ggggctgatattgatactttatgtgttggcccgtcttatgttaaccgagaggaggatttc
ttcatcatcttgcgtgatatattggctgagatggaagaggtgactgaccttcaacctgtt
accgatgcccatgtccctgtcatgaaatttaagttccaaggaatatctattgatcttttg
tatgctagcatctcacttcttgttgtgccacaggatctggatatctccaactcttctgtg
ctttctgatgttgatgagcaaactgtccgcagtctcaatggttgcagagttgctgatcag
attcttaaactcgttccaaatttcgagcacttccggacaacattaagatgcatgaagtac
tgggctaagaggcgtggggtctattcaaatgttactggatttcttggtggcgtaaactgg
gcgcttctggttgcacgcctgtgccagctttatccaaatgctattcccagtatgttggtt
tctcgattctttagagtgtatacacaatggcgttggccgaatccagtcatgctctgtgca
atagaagaggatgagcttgggattcctgtctgggatccgcgaaagtatcaccgtgaccgc
tatcatcttatgccaataataactcctgcttacccatgcatgaattctagttacaatgtc
tctcaaagcactcttcgtgttatgatggagcaattccagtatggtaacaagatctgtcag
gagattgagttaaacaaacaacactggagttccttatttgagcaatatatgttcttcgag
gcatataaaaactaccttcaggttgatgtactagcagcagatgcagaagatttattggct
tggaagggttgggtggagtcaaggttccggcagctgaccttgaagatagaacgagacaca
aatgggatgttaatgtgccatcctcaaccaaatgagtacgtggacacttccaagcagttt
cggcattgtgcttttttcatgggcttgcaaagggcagaaggatatggtggccaagagtgt
caacagtttgatatacgtggaactgtggatgagttcaggcaagacgtaaacatgtatatg
ttttggagacctgggatggacgtatttgtttctcatgttcgtagacggcagctccctcct
tttgtttttccaaacggatacaaaaggtttcggcaacccaagctccagaatcaacaaggc
ggagaacctggtgagccggttgaatctttgtccgccaatgttgagagacatgccaagaga
aaaaacgacaatgaattgatggatacaaggccagagaaacctgagaagcgtgcatctgtt
agtccacctagtgtagatgtagtttctcctgaaagtagtgctatcacaactggtgggact
cccccgattggcattgtttcaggtcctagaaccgaatgcttagtaactagtgatattggt
tgctccatccctaatgatcttaactctggtagcaagcaaaacgtagaagtggataatagg
tctctagttcaaggctgtcgtgacctggctgagcctgtaggaaaggatgcgagacctgat
cctagtgttgtggtaacatgtgaaggtgggcagaataaagaaaaaggtcgtgttgtggac
tctgcatctatcaatgacactgacaagcaacgtcttccaaggagaccaaatctgaaagag
gatgttgatagagttgagagggaatccatgttaggagaaattgctgatggtgttttgcag
aatggattatgtaggcggagccttgatcatgagggttttttggctgctgcaagtttggat
tcatctggggaacatagaaacttgcattcagatggattgttgaaaagtggtttgtcagaa
gaacttcagacaaataatttactcatggggatggggaggccggaagacggagctaggtca
gaatcattgcagaattcactgatgaggcatgtacttttgcaacccattgttaatttatgc
aaatcatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system