KEGG   Bacillus subtilis subsp. subtilis 168: BSU16580
Entry
BSU16580          CDS       T00010                                 
Symbol
polC
Name
(RefSeq) DNA polymerase III PolC-type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU16580 (polC)
   03430 Mismatch repair
    BSU16580 (polC)
   03440 Homologous recombination
    BSU16580 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU16580 (polC)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU16580 (polC)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU16580 (polC)
DNA replication proteins [BR:bsu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU16580 (polC)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU16580 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha PHP RNase_T DNA_pol3_a_NII DNA_pol3_finger DNA_pol3_a_NI HHH_6 Rv2179c-like HHH_3 tRNA_anti-codon RNase_H_2 Zn-ribbon_8 DZR
Other DBs
NCBI-GeneID: 939620
NCBI-ProteinID: NP_389540
Pasteur: BG10263
UniProt: P13267 A0A6M3ZAS8
Position
1727133..1731446
AA seq 1437 aa
MEQLSVNRRQFQILLQQINMTDDTFMTYFEHGEIKKLTIHKASKSWHFHFQFKSLLPFQI
YDTLTTRLTQSFAHIAKVTSSIEVQDAEVSESIVQDYWSRCIEELQGISPPIISLLNQQK
PKLKGNKLIVKTKTDTEAAALKNKYSSMIQAEYRQFGFPDLQLDAEIFVSEQEVQKFREQ
KLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYQIKDNEEIRTLDSIMDEERRITV
QGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDDGVPIAYNAAHRLLEEET
YVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHRPLSATIIELTGITDDML
QDAPDVVDVIRDFREWIGDDILVAHNASFDMGFLNVAYKKLLEVEKAKNPVIDTLELGRF
LYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGIQYHDELNENM
GQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLELELVRDEKALKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGEEKAKEIVVTNTQKVASLVDDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLPPHYVCPECQHSEFFNDGSVGSGFDLPDKTCPHCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDNNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVPDWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMED
INAKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSATEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq 4314 nt   +upstreamnt  +downstreamnt
atggaacagttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatg
acagatgataccttcatgacatactttgaacatggcgagattaaaaagctgacaattcac
aaagcttctaagtcttggcattttcattttcaatttaaatctttgctgccttttcaaata
tatgacacattaacaacgaggctgacgcaatcgtttgcccacatagcaaaagtgacatct
tcaattgaagttcaggatgccgaggtcagtgaaagtatcgttcaagactactggtcacgc
tgcattgaagaactgcagggcatttcgccgccgattatcagtcttttaaaccagcaaaaa
ccgaagctgaagggcaataaactgattgtcaaaaccaaaacagatacagaagcggctgcg
ctaaagaacaaatacagttccatgattcaagcagaataccgtcaatttggctttccggat
cttcagcttgatgctgaaatatttgtatccgagcaagaagttcaaaagtttcgggagcaa
aagcttgcggaagaccaagagcgggctatgcaggccttgattgaaatggagaagaaagat
aaagaaagtgatgaagaccaagcaccatctggtcctcttgttatcggttatcaaattaaa
gataacgaggaaatccgaacacttgacagcatcatggacgaagaacggagaattacggtc
caaggttatgtgtttgatgtggagacgcgcgagctgaagagcgggcgcacgctgtgtatc
ttcaaaattacagactatacaaatagtattttgatcaaaatgtttgcacgtgaaaaagaa
gatgcggcgctgatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagcatt
caaaatgatacatttgtcagagaccttgtcatgatcgcaaatgacgtaaacgaaataaaa
gcaaaaacccgtgaagattcagcacctgaaggagaaaaaagagtggaattgcatcttcat
tccccaatgagccaaatggatgctgttacgggtatcggaaagcttgtcgaacaggcgaaa
aaatgggggcatgaggccatcgctttgaccgaccatgctgtcgttcaatccttccctgat
gcgtattctgcggccaaaaagcatggaattaaaatgatttacgggatggaagcgaatctc
gtggatgatggcgtgccaattgcttataatgccgcacatcgtctgctcgaagaagaaaca
tatgttgtttttgacgttgagacgacaggattgtctgctgtatacgataccattattgag
ctggctgcagtaaaagtaaaaggcggagaaattattgataaatttgaggcgtttgcgaac
ccgcatcgtccgctttccgccacaatcatagagctgacagggatcacagatgatatgcta
caagacgctccggatgtcgtagatgtaataagagatttcagagaatggattggcgatgat
attcttgtcgctcataatgcaagctttgatatgggattcttaaatgtagcctataaaaaa
cttcttgaagtcgaaaaagctaaaaacccagtcattgatacgcttgaacttggacgtttt
ctctatccggaatttaagaaccaccggttgaacacactttgtaaaaagtttgatatcgag
ctcacacagcatcaccgtgcgatctatgatactgaggcaaccgcttatttgcttctgaaa
atgctgaaagacgcagctgaaaaaggtattcagtaccatgatgagttgaatgaaaatatg
ggtcagtccaatgcttatcaaagatcaagaccgtatcatgcaacattacttgccgtgaac
agcacgggacttaaaaatttatttaagcttgtgtcactttctcatattcattatttttac
agagtgccgcgtattccgagatctcagcttgagaaatacagggaagggcttctgatcggt
tctgcttgtgacaggggagaggtttttgagggaatgatgcaaaaatcgcctgaagaggtg
gaagatatcgcgtcattctatgattaccttgaggttcagccgcctgaagtgtatcgtcac
ttgctggagcttgaactggtccgtgatgaaaaagcgctgaaagaaattattgcgaatatc
acgaagctgggggaaaagcttaataaaccggttgttgctacgggaaatgttcattacttg
aatgatgaggataaaatctacagaaagattttaatatcctcacaaggcggggcaaatccg
ctgaataggcatgaactgccgaaagtgcatttcagaacgacagacgaaatgcttgaagct
ttttctttcttaggtgaagaaaaagcgaaggagatcgtagtcaccaatacccaaaaggtt
gcttctttagttgatgacatcaagccgattaaagatgatttatatacgccgaaaatcgaa
ggcgctgatgaagagatcagagaaatgagctatcagcgtgcaagaagcatttacggggaa
gagctgcctgaaattgtcgaagcgcggattgaaaaagagttaaagagtattattggccac
ggatttgctgttatttacttgatctctcacaaacttgtaaaacgttcactagatgacggg
tatctcgttggttcccgtggttccgtaggatcttcattagttgcgacacttactgagatt
actgaggtaaacccgctgccgccgcactatgtttgtcctgagtgccagcattctgagttc
tttaatgacggttctgtcggttctggttttgacctgcctgacaagacatgccctcattgc
ggaacgcctttgaaaaaagacggccatgatattccatttgaaacgttcttaggatttaaa
ggggacaaagtacctgatatcgatttgaacttctcaggggaatatcagccgcaagcacac
aattacacaaaagtattgttcggagaagacaatgtatatcgtgcgggaacaataggcacg
gtggcagaaaaaacagcctacggttatgtaaaaggctatgccggagacaacaatcttcat
atgcgcggtgccgaaatagatcggctcgtacagggatgcacaggtgtaaaacgtacaact
ggacagcaccctggcggtattatcgtagttccggattatatggatatttatgatttttca
ccgatccagttcccggcagatgccacaggttcagagtggaaaacgactcattttgatttc
cactccatccatgacaacctgttaaaacttgatattctcggacacgatgacccgactgtt
attcggatgcttcaagacttaagcggaatagatccgaaaacaattccgacggatgatcct
gaagtgatgaagatcttccagggaaccgaatcactcggtgtgactgaagaacagattggc
tgtaaaacgggcactcttggaattcctgaattcggaacccgatttgtccggcagatgctt
gaagatacaaagccgaccactttttctgagctcgttcagatttcaggcttgtctcacgga
actgatgtatggcttggcaatgcacaggagctcatccacaataatatttgtgagctgagt
gaggttatcggctgccgtgatgacattatggtttatttaatctatcaaggccttgagccg
tcccttgcctttaaaatcatggaattcgtgcgtaaaggaaaaggattaacgcctgaatgg
gaagaagaaatgaaaaataacaatgtcccagactggtatattgattcctgtaaaaagatt
aaatacatgttcccgaaagcccacgccgcggcatatgtcttaatggcagtccgcattgct
tactttaaagtgcatcatgctcttttgtattatgcggcttattttaccgttcgtgcagat
gactttgatattgatacaatgatcaagggctctacagcaatcagagcggtaatggaggat
ataaacgctaaaggacttgatgcttcaccgaaggaaaagaaccttctgactgttttagaa
ttagcgcttgagatgtgtgagagaggctattcattccaaaaagtcgatttatatcgctcc
agcgccacagagtttattattgacggcaacagtcttattccgccgtttaactctattcca
gggttagggacgaacgctgctttgaacattgtaaaagctcgcgaagaaggcgaattcctc
tcaaaagaagatttgcaaaagagagggaaagtatcaaaaacgattttagagtacttagat
cgccatggctgtctggagtcactgcctgatcaaaaccaattgtcactgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (63)   

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KEGG   Bacillus subtilis subsp. subtilis 168: BSU20340
Entry
BSU20340          CDS       T00010                                 
Symbol
yorL
Name
(RefSeq) DNA polymerase YorL
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU20340 (yorL)
   03430 Mismatch repair
    BSU20340 (yorL)
   03440 Homologous recombination
    BSU20340 (yorL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU20340 (yorL)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU20340 (yorL)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU20340 (yorL)
DNA replication proteins [BR:bsu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU20340 (yorL)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU20340 (yorL)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6
Other DBs
NCBI-GeneID: 939437
NCBI-ProteinID: NP_389916
Pasteur: BG13696
UniProt: O31902 A0A6M4JI35
Position
complement(2175596..2179513)
AA seq 1305 aa
MIGCHCHTDRSNIRLLDSTNSVKELLKTAVKMEYKGLAITDHEVLSAHLDAIRTVREMKK
KGDMPEDFKLILGNEAYLVDSLEEVRDNYKSGVTKFPHFLMLAMDPKGHEQLRILSSQAW
ENSFYTGTMERVPTVKKDVEELLSKDPGHIIATTACLGSEVNIHLLKIKAFEETGDSQSI
KQHKLKIHEFITWCIEVFGKDKFFIELQPALSEEQIYCNKKLIDIANGYDLQMIVTTDAH
YLRPEDRAIHQAFLNAKDGEREVDSFYEACFVQNVDEIHERMDYIDKEVIDQAIKNTMLI
GEMIEDYTIEHEPIIPKMELPNFKLRHLFKPAYDQYEYIKKMSESADEQDRYLLKLIEDG
FEEKLKTSELTREAFHKILNRINVELGELWEISQKLNQSMSSYYITVREIINIIWDDECG
GDSLVGAARGSAAGYLVNYLLDNTQINPMQYDLPHWRHIHKSRPDLPDIDIDTEGSKRQK
ILKALRERFGDKRVLQIATFGTEGSKSALQTACRGLGIDNDISQYLSGMIPFERGSNWPL
KHCFYGDKETGRKPIKEFIREVEQYPNLKETALKIEGLTNKRSSHAAGVIIFNDEYTKSN
AMMKTPKGAYITQFNMGDSEAMGSVKFDLLTIEALDKIRVTLDQLIENNEIEWQGSLKET
YNKYIHPDVIEYEDDKLWEMAGNGEIMDLFQFSTEVGHQSVVKVKPKNLLEAAVTNSLMR
LMSDGEEQPVDTYVKYKNNLNKWYEEMTRYGLSEKEIRVMERHLKDIYGVADTQEVVMQM
VMDKDIANFDIKESNYLRKSIAKKKEDVLKEVEELFFKKGKEIGTSDNLLNYVWNVQFKR
QFGYSFSLLHTLAYSIIALQELNLNYRYNPLYWNTACLTVNSGGIDTEDTKDNKKTAATN
YGKVASAIGNIRQRGIKIDLPDINKADFGFRTDINNNSILFGLKGMNGIGDDVIHHIVLN
RPYSDFNDFIERMFKSGIIKKGQVIQLIKGGCFDSFGNRQEIMKAFISLISEPKSKLTLS
NLKMLIENNIVPSEFAQEVRFFRFKDYISKKVYKTLKSPKDKLFLLDDVSASFYNQHFSE
DSVVDMLNGQLVISEKAFKKEYDNKMSNIKSWITTEEPLKKLNDCLLIKEWEKYADGSLG
KWEMDSLSYYYNDHELSGVNFAKYDIADFYKLPAEPVKGKPYQWRGKTLYEYETTRIIGT
VLDRDKNKHAITLLTPTGVVTVKQWSGSFSHYNKQISRSIGGGKKEVIEKSWYTRGTLLM
FTGFRRGNNFIPKVYKDSIYNHTVCRIDFVDNEGSMSLTTKRAEI
NT seq 3918 nt   +upstreamnt  +downstreamnt
ttgataggatgtcactgtcacacagataggagtaacataaggcttctagactcaacaaac
tcagttaaagaactgctcaaaactgcagtaaagatggaatataagggattggccataaca
gaccatgaagtcctctcagcacatttagatgctattcgaacagttagagaaatgaaaaag
aagggggatatgccagaagattttaaactgatattgggcaatgaagcgtacctagtcgat
tctttagaggaagttcgagataactataaatcgggagtgacaaaatttccgcatttcttg
atgttggcaatggatccaaaaggacatgagcagttaagaatactgtcttctcaagcctgg
gaaaactcattttatacaggaacaatggaaagagtgccgacagtaaaaaaggatgtagag
gagctattaagtaaagatccaggccacatcattgctaccacagcttgcttggggtctgag
gtaaacattcacctgttaaagataaaggcttttgaagaaactggtgattctcagtcaatt
aagcagcacaaactaaagattcatgagtttataacttggtgtatagaggtttttgggaag
gataagttttttatcgagcttcaacctgcactgagtgaagaacagatttactgtaacaag
aagctgatagatatagccaacgggtatgacttgcaaatgattgttacaacagatgctcac
tatctaagaccagaagatagagcaattcatcaagcctttttaaacgctaaggatggagaa
agagaagttgattccttttatgaagcctgtttcgttcaaaacgttgatgaaattcacgag
agaatggactacattgataaagaagtcatcgatcaggccataaaaaatacaatgctcatt
ggtgagatgattgaagactatactatagagcacgaaccaattatccctaagatggagctt
cctaactttaaattaagacatttatttaaaccagcatatgatcaatatgaatatataaaa
aagatgtctgaatcagcagatgaacaagatagatatctccttaagttaattgaggacgga
tttgaagagaaattaaaaacaagcgaactaacgagagaagcttttcataaaatattgaac
aggattaacgttgaactgggtgaactttgggaaatcagccaaaagctgaatcagtctatg
tcttcttattacataacagttagagaaatcattaatattatttgggatgatgagtgtgga
ggagatagtttagttggggcagccaggggaagtgctgcaggttacttagttaattatcta
ctcgacaatactcaaattaatccaatgcaatatgatttaccacattggagacatatacat
aaatcgagacctgacctaccagatatcgatattgatactgaaggatcaaaaagacaaaaa
attcttaaggcactaagagaaaggtttggagacaagcgtgttcttcaaattgctactttt
ggaactgagggttcaaaatcagcgcttcagacagcatgtagaggcttaggaatcgataat
gatatatcccagtatttaagtggaatgattccatttgaaagaggatctaactggcctttg
aagcattgtttttatggtgacaaagaaactggcaggaagccaattaaagagtttattagg
gaggttgaacaataccctaatcttaaagaaacagctttaaaaattgaagggttaactaat
aagcgctcttctcatgcagccggagtaattatctttaacgatgaatatacaaagtcgaat
gcaatgatgaaaactcctaaaggagcttatattacacagtttaatatgggtgacagtgaa
gccatgggctcagtaaagtttgaccttcttacaattgaagctttagataagattagagta
acattagaccaattaatcgagaataatgaaattgaatggcaaggaagcttgaaggaaaca
tacaacaaatacatccatccagacgtaattgagtatgaagatgataagctatgggaaatg
gctggtaatggggaaatcatggatttattccagttctcaactgaagtcggtcatcaatca
gttgtcaaagtaaaacctaagaacttacttgaagcagcagtaaccaattctttaatgagg
cttatgtcagacggtgaagaacagcctgtagatacatatgttaaatacaaaaataacctt
aataaatggtatgaagaaatgacacggtacggtctaagcgaaaaggaaatcagagtaatg
gagaggcaccttaaggacatttatggtgttgctgatactcaagaagtggttatgcagatg
gttatggataaagatatagctaactttgacattaaagaatcaaattatcttaggaaatcc
atagcaaaaaagaaagaagatgtactaaaagaagtggaagaattgttttttaaaaaagga
aaggagattggcacttctgataacctgttgaattatgtctggaatgttcaatttaaaaga
cagtttggctacagttttagtttacttcataccttggcatattcaattattgcattacag
gaattgaacttaaactatcgatataatcctttatactggaatactgcttgtttaacggta
aacagcggaggaatagataccgaggatacaaaagacaacaaaaagacagctgctacaaac
tacggaaaagttgcttcagccatcggaaacattagacaaagagggattaaaatagacctc
ccagatataaataaggctgattttggttttaggactgatattaacaacaattcaatttta
tttggacttaaaggaatgaatggaattggagacgatgttattcatcatatagttctaaat
agaccatatagtgactttaacgactttattgaaagaatgtttaagagcggcattattaag
aaaggacaagtaatccaattaataaaaggaggctgctttgattcttttggaaacaggcaa
gaaatcatgaaggcctttattagcttaatatcagaaccaaaaagtaagcttacgttgtct
aatttaaaaatgctaattgaaaacaacattgttccttcagaatttgcacaagaagtgaga
ttctttcgttttaaagattacatcagcaaaaaggtgtacaaaacattaaagtcgccaaaa
gataaactttttttattggacgatgtatcagcttcgttttataaccagcatttcagtgag
gatagtgtagttgacatgttaaacgggcagcttgtcatttctgaaaaagcttttaaaaaa
gaatatgataacaagatgtctaatataaagtcctggataacaacagaagaaccactgaag
aaattgaatgattgtttattaataaaagagtgggaaaaatacgccgatgggtcattagga
aagtgggaaatggattcattgagctattattataatgaccatgagctttctggtgtaaac
tttgccaagtatgatattgctgacttttataaactgccagcagagccggtcaaaggtaaa
ccttatcaatggagagggaaaactctctatgaatatgagactacacggattataggcact
gttttagatagggataaaaacaaacatgcaattactcttctaacacctacaggggtggtt
acagttaaacagtggtcgggcagctttagtcattacaataaacagatttctagatcaatt
ggtggcggaaagaaagaggtaatcgagaaatcttggtataccagaggaacattgctcatg
tttactggtttcagaagaggtaacaattttattccgaaggtctataaagatagcatatat
aatcacacagtctgcagaatagattttgttgataatgaaggaagtatgagtttgacaact
aaaagggcagaaatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (380)   
   KEGG ORTHOLOGY (1)   
   RefGene (375)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (397)   

Download RDF
KEGG   Bacillus subtilis subsp. subtilis 168: BSU29230
Entry
BSU29230          CDS       T00010                                 
Symbol
dnaE
Name
(RefSeq) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU29230 (dnaE)
   03430 Mismatch repair
    BSU29230 (dnaE)
   03440 Homologous recombination
    BSU29230 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU29230 (dnaE)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU29230 (dnaE)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU29230 (dnaE)
DNA replication proteins [BR:bsu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU29230 (dnaE)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU29230 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HROB tRNA_anti_2
Other DBs
NCBI-GeneID: 936593
NCBI-ProteinID: NP_390801
Pasteur: BG12583
UniProt: O34623 A0A6M3ZFD9
Position
complement(2991269..2994616)
AA seq 1115 aa
MSFVHLQVHSGYSLLNSAAAVEELVSEADRLGYASLALTDDHVMYGAIQFYKACKARGIN
PIIGLTASVFTDDSELEAYPLVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLHSYREG
IIAITPGEKGYIETLLEGGLFEQAAQASLEFQSIFGKGAFYFSYQPFKGNQVLSEQILKL
SEETGIPVTATGDVHYIRKEDKAAYRCLKAIKAGEKLTDAPAEDLPDLDLKPLEEMQNIY
REHPEALQASVEIAEQCRVDVSLGQTRLPSFPTPDGTSADDYLTDICMEGLRSRFGKPDE
RYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAAGSLVAYVLYITDV
DPIKHHLLFERFLNPERVSMPDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPSRPGMTLDEARQQSPQLDKRLRESSLLQQVYSIAR
KIEGLPRHASTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEENIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLK
PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILEDTYGVIVYQEQIM
MIASRMAGFSLGEADLLRRAVSKKKKEILDRERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLYEAKGSGIRI
LPPSVNKSSFPFTVENGSVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKMLEALIFSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLDESFSIKPKY
VETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLTAQGAVSILQAQRAVKRQLSLGVLL
SKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEVRQDK
IQFIMSRAELLEDMDAEKAPSVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYERQK
QTIKLPESFHINADHQVLYRLKELLGQKNVVLKQW
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgtcttttgttcacctgcaagtgcatagcgggtatagcctgctaaacagcgccgcggct
gtggaagaactcgtcagtgaagctgacaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcttgcaaggcgagagggatcaac
ccaataatcggtttgacggcttctgtttttacagatgacagcgagcttgaagcatacccg
ctcgtcctgctggcaaaatcgaatacaggctatcaaaacctgctgaaaatcagcagcgtt
ctgcaatctaaatcaaaaggcggactgaagccgaaatggcttcacagttatcgagaaggg
attatcgcaataacgcccggcgaaaaaggatatattgaaacgcttcttgaaggagggctg
ttcgaacaggctgctcaagcctcgctggaatttcagtctatattcggaaagggagctttt
tatttctcctatcagccttttaaagggaatcaagtcttgtctgagcagattctaaagctg
tcagaagaaacgggtatccctgttacggccacaggcgatgtgcattacataaggaaggaa
gataaggctgcctaccgttgtttgaaagcgattaaagcgggggaaaaactgacggatgca
cccgctgaagatttgcctgatctcgatttgaaaccactcgaagaaatgcaaaacatttat
cgagagcatcccgaggcactgcaagcttctgtagagatcgcggaacaatgccgggttgac
gtcagtctcgggcagacccgtctaccgtcttttccgaccccagacggaacgtccgctgat
gattatttaacggatatctgtatggagggactccgcagccgtttcggcaagcctgatgaa
cgataccttcgccgtcttcaatatgagcttgatgtcatcaagcggatgaagttcagcgat
tactttctgatcgtgtgggattttatgaagcacgcccatgaaaaagggattgttacagga
ccgggaaggggttctgcggcgggttctcttgtggcatatgtgctgtatatcacagatgtt
gacccgattaagcatcaccttctgtttgaaagatttttaaatcccgaacgcgtcagcatg
ccggatattgatattgactttcccgatactagaagggatgaagtcattcaatatgttcag
cagaaatacggtgcaatgcacgtcgcacagattatcacctttggaacacttgcggcaaag
gcggcgctccgggacgtcggcagagtattcggcgtcagcccgaaggaggcagatcagctt
gcaaaactcattccttcaagaccgggaatgacgctggatgaagcgagacagcagtcaccg
cagctggataagcggcttcgggagtcaagcctgcttcagcaagtctattcaattgcccgg
aaaatagaagggctgccaaggcatgcatcaacccacgcagcgggcgttgtcctgagtgaa
gaaccgttaacagatgttgttccgcttcaagaagggcatgaagggatctatttaacgcaa
tacgcgatggaccatcttgaagacttgggccttttaaaaatggatttcttaggtttgagg
aatctgacacttattgaatccatcacttcaatgattgaaaaagaagaaaatattaaaata
gacctttcaagtatttcctacagcgatgacaaaacgttctccttgctgtcaaaaggggat
acgacaggcattttccagcttgaatctgcagggatgagaagcgtcttgaaacggctgaaa
ccttcgggcctagaagatattgtggcggtcaatgcactgtaccggccgggtccgatggaa
aatattccgttatttatcgaccgtaaacacggtcgggcgcctgttcactatcctcatgaa
gatttaaggagcattttggaagatacatatggcgtcattgtgtatcaggaacaaattatg
atgattgcttcccgtatggcggggttttctttaggcgaagcggacctattgagaagggcg
gtcagcaaaaagaaaaaagaaatcctggacagagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaggtctacgatttaatcgtcaaattc
gcaaactatggctttaacagaagccatgcggtggcatacagcatgatcgggtgccagctt
gcgtatttgaaagctcattatccgttatattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatctctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaataaaagcagttttccgtttacagttgaaaacggatctgtcaga
tacagcctccgcgcgataaaaagtgtaggcgtctcagcagtcaaagatatatataaagca
agaaaagagaaaccatttgaagatcttttcgatttctgctttcgcgtgccgtcaaaaagc
gtaaatcgcaaaatgcttgaagcacttatcttttctggtgcgatggacgaattcggccaa
aaccgggccacgctgctcgcatccattgatgttgctttggaacatgctgagctattcgcc
gcggacgatgaccaaatgggattgtttttagatgaatcgttttcaattaagccgaagtat
gtggagacggaggagcttcctctggtggatttacttgcgtttgaaaaggaaacgcttggc
atttatttttcaaatcatcccctctccgccttccgaaaacagctcactgcgcaaggagca
gtctccattctgcaggctcagcgggcagtcaaaaggcagctttcactaggcgttctgctg
tcgaagatcaaaacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctcagt
gatgaaaccggcgagatggaagccgtagtcttccctgaacaattcagacagctttctccc
gttttaagagaaggcgctcttttgttcactgcggggaaatgtgaagttagacaagataag
atccaattcatcatgtcccgggcagaattattagaagatatggatgcagaaaaagcgcca
tcggtttatataaaaatagaaagcagtcagcacagccaggagatcctggcaaagattaag
cgcattttgctggagcataaaggggaaacaggcgtttatctctattatgaaaggcaaaaa
cagacgattaagctacctgagtcgttccatatcaatgcagatcaccaggtgttatatcgc
ttaaaagagctgttgggtcaaaaaaacgtcgttttaaaacagtggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (53)   

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