KEGG T01838: CT43

Bacillus thuringiensis serovar chinensis CT-43: CT43_CH5379

Entry

CT43_CH5379       CDS       T01838

Symbol

rpoE

Name

(GenBank) DNA-directed RNA polymerase subunit delta

K03048

DNA-directed RNA polymerase subunit delta

Organism

btc Bacillus thuringiensis serovar chinensis CT-43

Pathway

btc03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:btc00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CT43_CH5379 (rpoE)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btc03021]
    CT43_CH5379 (rpoE)
   03400 DNA repair and recombination proteins [BR:btc03400]
    CT43_CH5379 (rpoE)
Transcription machinery [BR:btc03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CT43_CH5379 (rpoE)
DNA repair and recombination proteins [BR:btc03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CT43_CH5379 (rpoE)

SSDB

Motif

Pfam:

HARE-HTH DUF4777 ColG_sub GDH2_N HTH_Crp_2 2Fe-2S_thioredx Sigma70_r4 PPP4R2 Pox_EPC_I2-L1

Other DBs

NCBI-ProteinID:

AEA19033

Position

complement(5321193..5321732)

AA seq 179 aa
MNFKQYSPEELKECSMIEVVHSVLGDKRQATTFNELVQEIAQVLGLSQEQVNAKLAQFYT
DLNIDGRFINLGENRWGLRSWYPYEQIDEEILPQPKPKKKRKVEEDGFDDYIEEDEDDFD
DADGNVDEEDDVEDLDKVLEDEDGDDDDLDDLEEDEDDDFAEEELEYDETEEEEEEEEL

NT seq 540 nt +upstreamnt +downstreamnt
gtgaattttaagcaatattcaccagaagagctaaaagaatgttcaatgattgaagttgta
catagcgttttaggggataaaagacaagcaacgacattcaacgagttggttcaagaaatc
gctcaagtgctgggactatctcaagagcaagttaatgcgaaactcgcacaattttataca
gacttaaacatcgatggacgtttcattaatttaggagaaaatcgttggggactacgcagc
tggtacccatatgagcaaattgatgaagaaatcttaccgcagccaaaaccgaagaagaaa
cgtaaagttgaagaagacggttttgacgactacattgaagaagatgaagatgactttgac
gatgcagacggaaatgtagacgaagaagatgatgtagaagatttggacaaggttcttgaa
gatgaagacggagatgacgacgatcttgatgatttagaagaggatgaagacgacgacttc
gctgaagaagaacttgagtatgatgaaactgaagaagaagaagaagaggaagaactgtag

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (11)   

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