KEGG T07046: JOS54

Bulleidia sp. zg-1006: JOS54_00025

Entry

JOS54_00025       CDS       T07046

Symbol

gyrB

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

bull Bulleidia sp. zg-1006

Brite

KEGG Orthology (KO) [BR:bull00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bull03032]
    JOS54_00025 (gyrB)
   03400 DNA repair and recombination proteins [BR:bull03400]
    JOS54_00025 (gyrB)
Enzymes [BR:bull01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     JOS54_00025 (gyrB)
DNA replication proteins [BR:bull03032]
Prokaryotic type
  DNA Topoisomerases
   JOS54_00025 (gyrB)
DNA repair and recombination proteins [BR:bull03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      JOS54_00025 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

QRG87452

Position

4383..6302

AA seq 639 aa
MKVDHAYEDEDIQVLEGLEAVRKRPGMYIGSTSSVGLHHLVWEIVDNGIDEAMAGYASQV
EITIDENNIVSVEDDGRGMPTGMNEKTGISTIETIFTVLHAGGKFGGGAYKVSGGLHGVG
ASAVNALSEFLEVTVYHEGNIYFVRFENGGHPVEPLKKIGTCNVNKHGSLVRFKADPTIF
TETRVYDFNTLRNRIRQLAFLNKGIRIKFHDLRESNPEKQNYDYLFEGGLKEYVKFINEN
KDKVHEDVIYSEGYEDNIQVEVACQYNTSYNPSIYTFCNNITTVDGGTHEEGFRMALTRI
VNKYARENNFLKEKDENVTQDDCKEGLTAIISVKHPNPQYISQTKSKLTNSEVRKIVSDI
FGTQFERFLMENPNQAKAIMEKIVIASQARLAAKRAKEITRKSSIKVGSLPGKLSDCSSK
DPSISEIYLVEGDSAGGSAKNGRDSHFQAILPLRGKILNVEKTRPEKAFENQEIRSMITA
FGAGVHDEVDTSKLRYHKIVIMTDADVDGAHIRTLLLTFFYRFLRPVLEQGYVYIAQPPL
FKVQKGQSIRYAYTDRQLDELKAEMGDRLSIQRYKGLGEMDASQLWETTMDPKTRTLIRV
TIDDAEYADQNFSMLMGEEVEPRKNFILENAHFVEKLDI

NT seq 1920 nt +upstreamnt +downstreamnt
atgaaagtggatcatgcttatgaagatgaagatattcaggttttagagggtttagaagcc
gttcgtaagcgtccgggtatgtatattggttctacttcttctgttggtttgcatcatctt
gtttgggaaattgttgataatggtattgatgaagcgatggccggttatgctagtcaagtg
gaaattaccattgatgaaaataatattgtatctgttgaagatgatggtcgtggtatgccg
acagggatgaatgagaaaacaggtatttcaaccattgaaacaatttttacagtcttacat
gccggtggtaaatttggtggtggtgcttataaagtttccggtggtttacatggagttggt
gcttcagcagtgaatgctttaagtgaattcttggaagtaacagtctatcacgaaggtaat
atttattttgttcgttttgagaatggtggtcatccggttgaaccattaaagaaaattggt
acttgcaatgtcaataaacacggttctttagttcgttttaaagccgatccaaccatcttt
acggaaacaagggtgtatgatttcaataccctaagaaatcgtattcgtcagttggctttc
ttaaataaaggaattcgtattaagttccatgatttacgagaaagcaatcctgagaaacaa
aattatgattatttatttgaaggtggtttaaaggaatatgtgaagtttattaacgaaaat
aaggataaagttcatgaagatgttatttattccgaaggttatgaagataatattcaagta
gaagtggcttgtcaatacaacacaagctataatccgtctatctatactttctgtaataac
atcacaacagtggatgggggaacgcatgaagaaggtttccgtatggctttaacacgtatt
gtgaataaatacgctcgagaaaataatttcttaaaggaaaaagatgagaatgtgacacaa
gatgactgtaaggaaggtttaacagcgattatctctgtgaagcatcctaatccacaatat
atttcacaaactaaatccaaattaacaaatagtgaagtgcgcaagattgtatcggatatc
ttcggtacacagtttgagcgtttcttaatggaaaatccaaatcaagcaaaagcaatcatg
gaaaagattgtgattgcgtcccaagctcgtttggccgcaaaaagggcgaaagaaatcacc
cgtaagagttcaattaaagtcggctctctacccggtaagctatcggattgttcctccaag
gatccaagcatctcggaaatttacttggtcgagggggattcagcaggcggttctgctaaa
aatggtcgtgattctcattttcaagccattcttcctttgcgaggtaaaattttaaatgtg
gaaaaaacacgtcctgaaaaggcttttgaaaaccaagaaattcgttcgatgattacagcc
tttggggcaggtgtgcatgatgaagtagatacttcaaaacttcgttatcataagattgtt
attatgaccgatgccgatgtggatggtgcacatattcgtactttattattaactttcttt
tatcgttttttaagaccggtattggaacaaggttatgtgtacattgctcaaccaccttta
tttaaggtacaaaaaggacagagtattcgttatgcgtacacggatcgccaattggacgaa
ttaaaagcggaaatgggtgatcgtttaagtattcaacgttataaaggtcttggtgaaatg
gatgctagtcaattatgggaaacaacgatggatcctaaaacacgtactttaattcgtgta
acaatcgatgatgcagaatatgcggatcagaatttctcaatgttgatgggagaagaggtt
gaacctcgcaagaattttattttagagaatgctcactttgtcgagaaattagatatttag

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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