KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_18115
Entry
AYM40_18115       CDS       T05111                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Pathway
buz00470  D-Amino acid metabolism
buz00550  Peptidoglycan biosynthesis
buz01100  Metabolic pathways
buz01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:buz00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AYM40_18115
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AYM40_18115
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    AYM40_18115
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:buz01011]
    AYM40_18115
Enzymes [BR:buz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     AYM40_18115
Peptidoglycan biosynthesis and degradation proteins [BR:buz01011]
 Precursor biosynthesis
  Amino acid ligase
   AYM40_18115
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATPgrasp_ST TTL PPR ATPgrasp_YheCD
Other DBs
NCBI-ProteinID: ANB74073
UniProt: A0A167W4R5
Position
1:complement(4125104..4126045)
AA seq 313 aa
MSSIDPKQFGKVAVLLGGDSAEREVSLNSGRLVLQGLRDAGIDAHPFDPAERPLAALKDE
GFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQLGIPTPP
FEAVLRGDDYEARAKDIVAKLGLPLFVKPASEGSSVAVIKVKSADALPAALLEAVKYDRI
VVVEKSIEGGGEYTACIAGDLDLPVIRIVPAGEFYDYHAKYIANDTQYLIPCGLPADEES
RLKVLARRAFDVLGCTDWGRADFMLDAGGNPYFLEVNTAPGMTDHSLPPKAARAVGISYQ
ELVVGVLALTLKD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgagcagcatcgaccctaaacaattcggcaaagtagcagtgctgctcggtggggactcc
gccgagcgcgaggtgtcgctcaattccggccgcctcgtgctgcaaggtctgcgcgacgcc
ggtatcgacgcgcatccgttcgatccggccgagcgtccgctcgctgcgttgaaggacgaa
ggcttcgtgcgcgcgttcaacgcgctgcatggcggctacggcgagaacggtcagattcag
ggcgcgctggatttttacggcatccgttacaccggtagcggcgtgctcggctcggcgctt
ggtctggacaagttccgcaccaagctcgtgtggcagcagctcggcattccgacgccgccg
ttcgaagccgtgctgcgtggcgacgactacgaagcacgcgcgaaagacatcgtcgcgaag
ctcggcttgccgctgttcgtgaagccggccagcgaaggctcgagcgtcgcggtgatcaag
gtgaaaagcgccgacgcattgccggcggcgctgctcgaagcggtcaagtacgacaggatc
gtcgtggtggaaaagagcatcgaaggcggcggcgagtacaccgcgtgcattgccggcgat
ctggatctgccggtgatccgcatcgtgccggccggcgagttctacgactaccacgcgaag
tacatcgccaacgacacgcagtacctgattccgtgcggcctgccggctgacgaagagtca
cgcctgaaagtgctggcgcgccgcgcgttcgacgtgctcggctgtaccgattggggccgc
gccgatttcatgctcgacgccggcggcaacccgtacttcctcgaagtgaacacggcacct
ggcatgaccgatcactcgctgccgcctaaagcggcgcgcgcggtgggcatcagctatcag
gaactggttgtcggcgtgttggcgctgacgctcaaggactaa

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