KEGG T03110: COCCADRAFT

Bipolaris zeicola: COCCADRAFT_35682

Entry

COCCADRAFT_35682  CDS       T03110

Name

(RefSeq) hypothetical protein

K13100

pre-mRNA-splicing factor CWC22

Organism

bze Bipolaris zeicola

Brite

KEGG Orthology (KO) [BR:bze00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bze03041]
    COCCADRAFT_35682
Spliceosome [BR:bze03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    COCCADRAFT_35682
Complex C
   U4/U6.U5 tri-SnRNP related factors
    COCCADRAFT_35682

SSDB

Motif

Pfam:

MA3 MIF4G HEAT_5MP1_2

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

JGI:

UniProt:

Position

Unknown

AA seq 697 aa
MEVASAVRLPSPSPEPEVDAQDVPRKRERSPYDGPSAGPSKRSRRDEEDDHRNGEAGRRP
APKPTTDDLPEDDSRLKLFQNAFSANRKLPIDDSKTRAGGAYIPPARLREMQKSITDKKS
AEFQRMAWEALKKSIQGLINKTNTANIKMIVPELFSENLVRGRGLFCRAIMKAQAASLPF
TPIYATMVAIVNTKLPQVGDLLVRRLIVQFRKGFRRNDKAVALSSTMFLSHLVNTQVVHE
ILIAEILLLLLNKPSDDSVEIAVGIMKEVGAFLDEMKPAIANAIFDQMRNILHEADIDKR
TQYMIEVLFEVRRTKYKDNPVVREELDLIEEEDQITHNHTLEGDLKVEDGLNIFKFDPDY
EAHEEEYAKIKAEILGEEEGSDDDGYTDASSEDEEDEEIKAMDVKDQTNADLVNLRRTIY
LTIKSSGGFEECVHKLMRINLPQGLENELTTMIVECASQERTYEKFYGMIGERFCKLNRM
WTDLFEEAFAHYYETIHRFETNRLRIIAQFFAHLLASDGIGWHVFQVVKMTEEDTTSSSR
IFVKILFEELLASLGQKAVVERFKDPMLQDSLTGIFPTDADDQSKTRFSINFFTAIGMGV
LTEGMRDWLKNSAPKPKPLPEPESDSEDDRSVSSRSSYTSSSYSRSRSPPYRLTVSLPTS
APSKIFLVSFAVAVSSTKTQTRFKQPSAIEGQGQSEG

NT seq 2094 nt +upstreamnt +downstreamnt
atggaggtcgcatctgccgtccgactaccttcgccttcaccagagcccgaggtcgatgcg
caagatgttccgcgcaaacgcgagcgctcgccatacgatgggccgagtgctgggccatcc
aagagaagtcggagagatgaggaggatgaccatcgcaacggagaagctggccgtcgcccg
gcgccgaagccaacgaccgatgacctgcccgaggacgactcgcgattgaagctcttccag
aatgccttcagcgcgaaccggaagctgccgattgacgactccaagacacgtgctggaggc
gcgtacatcccacccgctcgcctgcgcgagatgcaaaagtcgattacggacaagaagagc
gcagagttccagcgcatggcttgggaggcgctgaagaagtcgattcagggtctgatcaac
aagacgaataccgccaacatcaagatgattgtgcctgagctattttccgagaacctggtg
cgtggacgaggcctgttctgcagagccatcatgaaggcgcaggcggccagtttgcccttt
accccgatttacgcaaccatggtagccattgtgaacaccaaactacctcaggtcggcgat
ttgctggttcgtcgtttgatcgtacagttcaggaagggattcaggaggaatgacaaggcc
gttgcgctgtcgagcaccatgtttctgtcccacctcgtcaacacccaggtcgtccatgaa
atcctcattgcggaaatcctcctgctcctactcaacaagccttccgacgattctgttgag
attgccgtcggcatcatgaaggaagtcggcgctttcctcgacgagatgaaacctgccatt
gccaacgccatctttgaccagatgcgcaacatcctccacgaagctgacattgacaagcgc
acgcaatacatgatcgaggtgcttttcgaagttcggcgcacaaagtacaaggataacccg
gtcgtgagggaagagttggatcttattgaggaggaagatcaaattactcacaaccataca
cttgagggtgatttgaaggttgaggatggcttgaacattttcaagttcgatcctgattac
gaagcccatgaggaggaatatgcaaagatcaaggcggaaattctgggtgaagaggagggc
agtgacgatgacggatatacggatgcgtcatccgaagatgaggaagatgaagagatcaag
gctatggatgtcaaggatcagaccaacgcggatctcgtcaacttgcgccgaaccatctac
ctcaccatcaagagtagtggtggattcgaagagtgtgtacacaagctgatgcgaatcaac
ctgccacagggtctggagaacgagctcactaccatgattgtggagtgcgctagccaggag
agaacctacgagaagttctacggtatgatcggagagcggttctgcaagctgaaccggatg
tggacagacctgttcgaggaagcatttgcgcactactacgagaccattcaccgttttgag
acgaaccgcctgcgcatcatcgcccagttcttcgcccatttgctagcatccgacggtatc
ggctggcacgtcttccaagtcgtgaagatgacggaagaggacacgacttctagttctcgt
atctttgtcaagattcttttcgaggagcttcttgcctcgctcggccagaaggctgtagtt
gaacgcttcaaggaccccatgctccaggacagccttactggcatcttccccacagatgcg
gatgaccagagcaagacacgcttctcgatcaacttcttcactgctatcggcatgggtgtg
cttaccgagggtatgcgtgactggctcaaaaacagtgcacccaagccaaagccacttccc
gagccagagagtgattcggaagacgatcgcagtgtttcatcgcggtcaagctacacctcg
agcagttactctcgatcacgaagccctccctacaggctcactgtctcgctccccacctcc
gcgccgtcgaagatattcctcgtctccttcgcggtcgccgtctccagcaccaagacgcag
acgcgattcaagcagccctccgccatcgaagggcaagggcaaagcgagggatga

All links

Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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