KEGG   Campylobacter sp. RM16704: CAQ16704_0003
Entry
CAQ16704_0003     CDS       T03560                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
camr  Campylobacter sp. RM16704
Brite
KEGG Orthology (KO) [BR:camr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:camr03032]
    CAQ16704_0003 (gyrB)
   03400 DNA repair and recombination proteins [BR:camr03400]
    CAQ16704_0003 (gyrB)
Enzymes [BR:camr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CAQ16704_0003 (gyrB)
DNA replication proteins [BR:camr03032]
 Prokaryotic type
  DNA Topoisomerases
   CAQ16704_0003 (gyrB)
DNA repair and recombination proteins [BR:camr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CAQ16704_0003 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 PA_decarbox
Other DBs
NCBI-ProteinID: AJC85520
Position
2534..4852
AA seq 772 aa
MQKNQNYSAGNIKVLKGLEAVRKRPGMYIGDTNINGLHHMIYEVVDNSIDEAMAGFCDTI
NIEITTEGSCIVSDNGRGIPVGIHPTENIPTLTVVLTVLHAGGKFDKDTYKVSGGLHGVG
VSVVNALSKKLVATVHRDGEIYRQEFSEGKVISNFETIGTSKKTGTIIEFWPDEQIFEIT
EFDYEILAKRFRELAYLNPKITINFKDNRIGKSESFHYEGGISQFVMDMNKKQALTKAIF
FNVDEEDVNVEVALLYNDAYNENLLSFVNNIKTPDGGTHEAGFRMGLTRVISNYIEANAS
AREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSKASFEYLTKYFE
ENPIEAKAIMNKALMAARGREAAKKARELTRKKESSSVGTLPGKLADCQSKDPSESEIYL
VEGDSAGGSAKQGRERAFQAILPLRGKILNVEKARLDKILKSEQIQNMITAFGCGIGDEF
DIEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFMNDLVTNGHIYLAQPPLYRYKKGQKK
EIYLKDEKTLNDYLIETGIESSTYEGIGLNDLKDFLKIVAAYRSVLKELEKRFNVISVIR
YLIENPDLIKASNEELFKIIKEFLEKQNHNILNSYINENEIRVYVQTENGLEELIINDDL
FTNPLYEEANYIYQKIKDRDLKFDKDILEILDEVEKNAKKGAYIQRYKGLGEMNPEQLWE
TTMDPNNRRLLKITIEDAQRANDTFNLFMGDDVEPRREYIQAHAKDVKHLDV
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgcaaaaaaatcaaaattatagtgctggaaatattaaagttttaaaaggcttagaagct
gttagaaaacgtcctggtatgtacataggtgataccaatataaatggactccatcatatg
atttatgaagtagtagataattctattgatgaagcaatggcaggtttttgtgatacgatt
aatatagaaatcactacagaaggttcttgtatagtgagtgataatggtcgtggtattcca
gttggaattcatcctactgaaaatattcctactttaacagttgttttaacggttttacat
gcgggtggtaaatttgataaagatacttataaagttagtggtggtttgcatggggttggt
gtaagtgttgtaaatgctttatcaaaaaagctagttgctacagtgcatagagatggagaa
atttatagacaagaattttcagaaggaaaagtaataagtaattttgaaactataggaact
agtaaaaaaacaggaacaatcatagaattttggccagatgaacaaatttttgaaataact
gaatttgattatgaaattttagctaaaagatttcgtgaacttgcatatttaaatccaaaa
ataactataaattttaaagacaatcgtataggaaaatcagaaagctttcattatgaaggt
ggtataagccaatttgtaatggatatgaataaaaaacaagctttaactaaagccatattt
tttaatgtagatgaagaagatgtaaatgttgaagtagcattgctgtataatgatgcttat
aatgaaaatttactttcttttgtaaataatattaaaactccagatggtggaacacatgaa
gctggttttagaatgggcttaactcgtgttattagtaattatattgaagcaaatgctagt
gctagagagaaagattctaaaataacaggtgatgatgtaagagaaggtttgatagccgtt
gtaagtgtaaaagtacctgaacctcaatttgaaggacaaactaaaggaaaattaggttca
agctatgttagacctatagtttctaaagcttcttttgaatatttgacaaaatattttgaa
gaaaatcctattgaagcaaaagctattatgaataaagctttaatggcagctcgtggtaga
gaagcggctaaaaaagctagagaattaacccgtaaaaaagaaagttcaagtgtaggaact
ttgcctggaaaattagctgattgtcaaagtaaagatccaagtgaaagtgaaatttattta
gttgagggtgatagtgcaggaggctctgcaaaacaaggtagagaaagggcttttcaagca
attttacctttaagaggtaaaatacttaatgttgaaaaagcaagacttgataagatatta
aaaagcgaacaaattcaaaatatgatcacagcttttggttgtgggataggtgatgagttt
gatatagaaaaattaagataccataaaatcatcattatgacagatgctgatgtagatggg
tctcatatacaaactttgcttttaacattcttctttcgctttatgaatgatcttgtaaca
aatggacatatttatttagctcaaccacctttataccgctataaaaaaggtcagaaaaaa
gaaatttatctaaaagatgaaaaaactctaaatgattatttaattgagacaggtatagaa
agttctacttatgagggtataggattaaatgatttaaaagattttctaaaaatcgttgca
gcttatagaagtgttttaaaagaattagaaaaaagatttaatgtaatttcagtaattaga
tatttgatagaaaatcctgatttgataaaagcttctaatgaagaattatttaaaattata
aaagaatttttagaaaaacaaaatcacaatatcttaaattcatatatcaatgaaaatgaa
attcgcgtatatgtacaaactgaaaatggtttagaagagcttatcataaatgatgattta
tttactaatcctttgtatgaagaagcaaattatatttatcaaaaaattaaagatagagat
ttaaaatttgataaagatattttagaaattttagatgaagtagaaaaaaacgctaaaaaa
ggtgcttatatacaacgctataaaggacttggtgagatgaatcctgaacaactttgggaa
acaactatggatccaaacaatcgtcgtttattaaaaatcaccatagaagatgcccaaaga
gcaaatgatacttttaaccttttcatgggtgatgatgtagaaccacgccgtgagtatata
caagctcatgctaaagatgttaagcatttggatgtttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (10)   

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