KEGG   Capsicum annuum (peppers): 107847931
Entry
107847931         CDS       T04646                                 
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
cann  Capsicum annuum (peppers)
Pathway
cann00730  Thiamine metabolism
cann01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cann00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    107847931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cann03009]
    107847931
Enzymes [BR:cann01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     107847931
Ribosome biogenesis [BR:cann03009]
 Prokaryotic type
  GTPases
   107847931
SSDB
Motif
Pfam: RsgA_GTPase MMR_HSR1 ABC_tran AAA_29 nSTAND1 AAA_23 IstB_IS21 AAA_16 AAA_21 AAA_22 SMC_N B2 Dynamin_N IIGP Adeno_IVa2 AAA_28 AAA_15 Septin
Other DBs
NCBI-GeneID: 107847931
NCBI-ProteinID: XP_016548021
Position
11:85876948..85885762
AA seq 488 aa
MKIASFSLLRLPFTASTTGHRFFSAVIVAAGHHENPNNVSRKLQQPNKNLLKARETINKH
FSTLAPILSQEDKPHLSYDQAVGTVASSQANFMRVIVQHIPPESSVDPSGSFSKGSGEIG
VELLCVVKAVLKKIKRRVLVGDKVLVGSIDWVDKRGAIENVFQRKTEILDPPVANVDHLL
VFFSMDQPKIEPFSLTRFLVEAESTGIPLTLALNKSELVSQEEIKAWKCRLRSWAYEPIF
CSIDSKRGLDTLQFIMREQTSVIVGPSGVGKSSLINALRGNKHILHAVEERNWFDPQILG
SKWYEEQRVGEVSVRSGRGKHTTRHVSLLPLPDGGYLADTPGFNQPSLIEVTKNSLAHHF
PEIRKMLKDSEPANCAFNNCLHLGEPGCLIKGDWERYPYYLQLLDEIKIREEFQLRTIGT
KREGDVRCKIGDKGVVQAEPRLEAKKYRRQSRKRVNQSLLDELDELDDEDDTLEDDNPIL
RAMREENQ
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgaagatcgcttcgttttcacttcttaggcttcctttcaccgcctccactactggccac
cgcttcttctccgctgtcatcgtcgctgccggccatcacgaaaaccctaacaatgtgtca
aggaagctccaacaaccgaacaaaaatctcctcaaagctcgtgaaactatcaataaacat
ttctctactctagcaccgattctttctcaggaagacaaacctcacctctcttacgaccaa
gccgtaggtaccgtggcgtcttcacaagcaaacttcatgcgcgttatcgtccaacatatt
cctccagaaagttctgtggatccttctggaagcttcagcaaaggttcgggggaaattgga
gtggagttgttgtgtgtggtgaaggctgtgttgaagaagattaagaggagagttttggtt
ggggataaggttttggtaggttcaattgattgggtggataaacgtggagctattgagaat
gtgtttcaaaggaagacggagattttggatcctccagtagctaatgtggatcatttgcta
gtgtttttctctatggatcagccaaagattgagccattctcgctcactaggttcctcgta
gaagctgaatcaaccggaattcctctcactcttgcgttaaataaatcagaacttgtttct
caagaggaaataaaagcatggaaatgtaggcttcgaagttgggcctatgaaccaatcttt
tgcagcattgattccaagcgtggacttgatacactccagtttattatgagagaacaaaca
tccgtcattgttggtccaagtggagtggggaaatccagcctgatcaatgctttgagaggc
aataagcacattcttcatgcagtcgaagagcgaaactggtttgatcctcagattctaggg
agcaagtggtatgaagagcaacgtgtcggggaagtgtcagtaagaagcggcagaggaaag
catacaacaaggcacgtgtctttgcttccattgcctgatggggggtatcttgctgatact
ccaggatttaaccagcctagtttgattgaagtgacaaagaattctcttgcacatcatttt
ccggagatccgcaagatgcttaaagatagtgaacctgcaaactgtgcattcaataattgc
ttgcatcttggtgaaccggggtgccttataaaaggtgattgggaaagatatccatattat
cttcagttgcttgacgaaattaagattagggaggaatttcagttgaggaccattggaact
aaacgagaaggtgatgttaggtgcaaaataggagacaagggagttgtgcaagcagaaccg
cggctggaggccaagaaatacaggagacagtctcgtaaaagagtgaaccagtcattacta
gatgaattggatgaactcgatgatgaagacgatacactggaggatgacaatcctattcta
agagcaatgagggaagaaaatcaatag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (18)   
   Pfam (18)   
All databases (29)   

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