KEGG   Capsicum annuum (peppers): 107850667
Entry
107850667         CDS       T04646                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107850667
Spliceosome [BR:cann03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107850667
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107850667
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 107850667
NCBI-ProteinID: XP_047257007
Position
1:244413450..244420953
AA seq 1293 aa
MEKVERRRHEDRSSDDDGRGERRARKRVVKRESDDDGGGGDNGRVDRRERRRISEHGNGG
GGGDNGRDNRRERRGTTERESDDDGDDGRVDRRARRKTTERGSGGDDGRGRRRTGDGSEE
EEEEEEDGGGDDGRDDRRRKNERGSRDDRRASMRVIKHENDDDDGGGDNTRVDDRRRRDD
EDLKKIEQQRHGDGSSNDDDERDGRRRRTERGSRDDSRASMRVIKHENDDDDGGGDNTRV
DDRRRRDDEDLKKIEQQRHGDGSSNDDDERDGRRRRTERGSRDDSRARRRVIKHETDYGG
DDNSRVDRRRRRNDDDLKRVERQRHGGGSSNDDEDDERDDRRLSKGRIERGSKDDSDDDL
MRKRQRDEREDRAERGNRRERQPKQEEEEGDDDERDKTRERRRKSERVDEDNEKDDQKER
RRRNDREDDAGRNRTRQRRPKDESEEEDERADRRERRRLVERGSDDDGGDTTNDRRLSRR
RTERTSKDDSDDDLRQKRQRYESEGSAEKGDSRRPKEGHEEDDGGGRRKTKEMRRRSESI
DDDRSGRRRRNDSEDDAGRNGRRQRRLKDDSEDDDDDRKESRKKISQVDEDDERDDRRKR
RRRNEGEAGEVKDDRKERSRRNGDEKDVRKERSRRNVDERDNRKEMRRHEDDDEKVHKRR
ADSDDNNRKDMRRKVEDDKHGKENNRKDNAQEDVALKAREASKMPTQDGNLNVDTANLGR
SGGVYIPPFKLARMMKEVQDKSSTEYQRMTWDALRKSINGLVNKVNAANLKNIIPELFAE
NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIILQLQRAYKRN
DKPQLLAAVKFIAHLVNQQIVHELIALELLTVLLDKPTDDSVEVAVGFVTECGAMLQDLC
PRGLHGIFERFRGILHEGEIDKRVQFLIESLFALRKAKFQGYQAVRPELDLVEQEDQLTH
EVSLSDTIDPEIALDIFKPDPNFLENERKYEELKKAILGEESEEERDSDAESEDEDEDED
EESEEEDEEQMKIKDETETNLINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCI
MLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFF
AHLLGTDALPWHALAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQDS
FDSIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMQQQKPVSESDESGSSD
SESSGSESESSSSTSDESNSESDNSRRKRRRRR
NT seq 3882 nt   +upstreamnt  +downstreamnt
atggagaaagtagagcggcgaaggcatgaggatagaagctcggatgatgatggaagaggt
gagagaagggcgaggaagcgagtagttaaacgcgaaagtgatgatgatggtggtggaggt
gataatggaagagttgatagaagggagagaaggaggataagtgaacatggaaatggtggt
ggtggtggtgataatggaagggataataggagggagaggaggggaacaactgaacgtgaa
agtgatgatgatggtgatgatggaagggtggataggagggcgaggagaaaaacaactgaa
cgcggaagtggtggtgatgatggaagggggaggaggagaactggagacggaagtgaggag
gaggaggaggaggaggaggatggtggtggtgatgatggaagggatgataggaggcgaaaa
aatgagcgtggaagtagggatgatagaagggcaagtatgcgagtaattaaacacgagaat
gatgatgatgatggtggtggtgataatacaagggtggatgataggaggagaagggatgat
gaagatttgaagaaaatagagcagcaaaggcatggggatggaagctcgaatgatgatgat
gaaagggatggtaggaggcgaagaactgagcgtggaagtagggatgatagtagggcaagt
atgcgagtaattaaacacgagaatgatgatgatgatggtggtggtgataatacaagggtg
gatgataggaggagaagggatgatgaagatttgaagaaaatagagcagcaaaggcatggg
gatggaagctcgaatgatgatgatgaaagggatggtaggaggcgaagaactgagcgtgga
agtagggatgatagtagggcaaggaggcgagtaattaaacacgagactgattatggtggt
gatgataattcaagggttgataggaggaggagaaggaatgatgatgatttgaagagagta
gagcggcaaaggcatgggggtggaagctcaaatgatgatgaagatgatgaaagggatgat
aggaggctgtctaagggaagaattgaacgtggaagtaaggatgatagtgatgatgatttg
atgcggaagaggcaaagagatgaacgtgaagatcgtgctgaaaggggcaataggagggaa
aggcaaccaaaacaagaagaggaagaaggtgatgatgatgaaagggataaaacgagggag
aggaggagaaaaagtgaacgggtagatgaggataatgaaaaagatgatcagaaggagaga
agacgaagaaatgaccgtgaagatgatgctggaaggaatagaacaagacagaggaggcca
aaagatgaaagtgaggaggaagatgaaagggctgataggagggaaaggaggcggttagtt
gaacgcggaagtgatgatgatggcggtgatacaacgaatgataggaggttgtctaggcga
agaactgaacgtacaagtaaggatgatagtgatgatgatttgaggcagaagaggcaaaga
tatgaaagtgaaggtagtgctgaaaagggtgatagtaggaggccaaaagaaggacacgaa
gaagatgatggtggtggaaggcgtaaaacgaaggagatgaggagaagaagtgaatcgata
gatgatgataggagtgggagaagacgaagaaatgacagtgaagatgatgctggaaggaat
ggcaggagacagaggaggctgaaagatgatagtgaagatgatgatgatgataggaaggaa
agcagaaaaaagataagccaagttgatgaggacgatgaaagggatgataggagaaagagg
agacgaagaaatgaaggtgaagctggtgaggtaaaggatgataggaaggagcggagtcga
aggaatggagatgaaaaggatgttaggaaagagcggagtcgaaggaatgtagatgaaagg
gataataggaaggagatgaggcgacatgaagatgatgatgaaaaggtgcataagagaagg
gctgatagtgatgacaataatagaaaagatatgaggcgaaaggttgaggatgataagcac
ggaaaagagaacaataggaaagataatgctcaagaggatgtggcgctgaaagcccgtgag
gcttccaagatgccaacgcaagatggtaatttgaatgtcgatacagcgaatttgggcagg
agtgggggagtgtacattccaccattcaaattggcaagaatgatgaaggaagttcaggac
aagagcagtactgagtaccagagaatgacttgggatgctctgagaaaaagcattaacggg
ctggtgaataaagttaatgcagcaaacctcaagaacattattccggagttgttcgcagag
aatttaattcgagggaggggtttgttttgtagatcctgtatgaaatcccaaatggcttct
ccgggttttactgatgtgtttgctgctttggttgctgtcgttaataccaagttcccagaa
gttggtgatcttttgttaagaaggatcatacttcagctgcaaagagcttataaacgtaac
gataagcctcagctgttagcagctgtcaaatttattgctcaccttgtgaaccaacaaatt
gtccacgagcttattgctcttgaactgcttactgttttgttggataaacctactgatgat
agtgttgaggttgcagttggttttgttacagaatgtggtgcaatgcttcaggacctctgt
ccacgaggattacatggaatctttgagagattccgtggtatacttcatgaaggagaaata
gataaacgggttcagttcttaattgaaagcctctttgcattgcgtaaagcaaagtttcag
ggttaccaagctgtgcgtccagaactcgaccttgttgagcaggaagatcagttaacacat
gaagtctctctctcagatacaatagatccagaaattgctctagatattttcaagccggat
cctaatttcttagaaaacgagaggaagtatgaagaattaaagaaggcaatacttggtgaa
gaatctgaggaagaaagggattctgatgcagaatcagaggatgaagatgaagatgaagat
gaggagtctgaagaagaggatgaagaacaaatgaaaataaaggatgaaacagagacaaac
ttaatcaaccttcggagaactatctaccttacaattatgtctagtgttgactttgaagaa
gcagggcataagctattgaaaatcaaactagagcctggtcaggagatggagttgtgcata
atgttattggagtgctgcagtcaggagaggacttatcttcgttactatggattactggga
cagcgattttgcatgatcaacaaaattcatcaagaaaactttgagaaatgctttgtgcag
cagtactccatgatccaccggcttgaaactaataaacttcgtaacgtggccaagtttttt
gcacatttactcggcactgatgctcttccttggcatgctttggcttatatacggctgaca
gaagaggacacaacctcttcttctcgtatatttatcaaaatcctattccaggaattgtcg
gagcaccttggcatccgcttgttgaatgagcgtcttaacgaccccaccatgcaagattcc
ttcgattctattttcccaaaggataatcccaagaacacaaggtttgctatcaactttttc
acttccatcggtctgggtggaattactgaaaatctacgagagtatctgaagaacatgcca
aggcttatcatgcaacaacagaagcctgtttctgaatcggatgagtctgggagttctgat
tctgaatcttcaggatctgaatcagaatcatcgtcatccacttcagacgaaagtaatagt
gaaagtgataatagtcggaggaagcggaggcggcgaagatag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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