KEGG   Capsicum annuum (peppers): 107876108
Entry
107876108         CDS       T04646                                 
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107876108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cann03019]
    107876108
Enzymes [BR:cann01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     107876108
Messenger RNA biogenesis [BR:cann03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     107876108
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 107876108
NCBI-ProteinID: XP_016578595
Position
6
AA seq 726 aa
MGVSNLPPPKQYGVTKPLSLAGPMEADIQRTKELEKFLVGAGLYESAEEAAKREEVLCQL
KQIVKDWVKDLTRLRGYSNQMVEDANAVILTFGSYRLGVHGPGADIDTLCVGPSYVNREE
DFFLVLHNILAEREEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPHDLDISSE
SMLCNVDEPTVRSLNGCRVADKILKHVPNIEFFRTTLRCLKFWAKQRGVYSNVTGFLGGV
NWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCQIEDKELGFSVWDPRKNPW
DRTHQMPIITPAYPCMNSSYNVSASTLRVMTEQFEFGNNICQEIELNKAQWTALFEKYPF
FESYKNYLQVDIVAADADDLLVWRGWVESRLRQLTLMIERDTFGKLQCHPYPHECVDQSK
QCAHRAFFMGLQRGRGELVQDGQQFDIRGTVDEFRHQVNMYMYWKPGMEMFVSHVRRKQI
PSYVLPDGYKRNQTPRPMSGQLAEKPSSTICRSSSGERGLKRKKELEGAEENQQNRDKRP
SISPPRRDSSSPELIVGQKSGMLLQQRSATVSGGNRKSEEISNNFTNDKVQFAVLDKGAH
VESTKSRGAQFEESAVGSVYRPSGVANLVEAGTFGDPVHELLQLSHDGRAVDSTGCNSIC
SSQGDLYTADSKSLLNNVCENGSRYFEDALLELEPKAARGVLTSLDSVGSESVQKSSIRV
SVTSTA
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgggggtttccaatttgccaccgcccaagcaatatggggtgacaaaacctttgtcttta
gcagggcctatggaggctgatattcaacgtactaaagagttggaaaagttcttggttggt
gctggattatatgaaagtgctgaggaggctgctaagagagaagaagttctttgccagcta
aagcagattgtgaaggactgggtgaaagatcttactcgactgagagggtatagcaatcag
atggtcgaggatgcaaatgctgtcattttaacctttggttcttatcgacttggggtgcat
ggtcctggagctgacatagacaccttatgtgttggaccatcctacgtgaatcgagaggag
gacttctttttggtattgcataatattttagcggagagggaagaagttactgaactacaa
ccagttccagatgcacatgtccctgttatgaagtttaagtttgatgggatctcaattgat
cttctctatgcaagcatttctcttttggttgtaccacatgatttggacatttccagtgaa
tccatgttatgcaacgttgatgagccaactgtaaggagccttaatggctgcagggtggca
gataaaatccttaaacatgttccaaatattgagtttttccggaccactcttcgatgttta
aagttttgggctaaacagcgtggtgtttattcaaatgtgactggatttcttggtggagtg
aactgggctcttctggttgctcgggtttgccaactctatccaaatgctgttccgagtatg
ctggtttctcgttttttccgtgtatatacacaatggcgctggccaaatcctgtgatgctt
tgtcaaatagaggataaagaattaggattttctgtctgggatccacgtaaaaacccttgg
gaccgtacacatcaaatgccaattattacacctgcctatccttgcatgaactctagctac
aatgtgtctgcaagtactcttcgagttatgaccgaacaatttgaattcgggaataacata
tgtcaggaaattgagctgaataaagcccagtggactgcattatttgagaagtatcctttc
tttgaaagctacaagaactatttgcaagttgacatcgttgcagctgatgctgatgacttg
cttgtgtggagaggctgggtcgaatcccggctaagacagcttactttgatgattgagcgg
gacacatttggtaaactgcagtgccatccttatccccatgagtgtgtggaccagtccaaa
caatgtgcacatcgtgccttcttcatgggtttgcagaggggacggggagagttagttcaa
gatggccagcaatttgatattcgtgggacagttgatgaatttagacaccaagtaaatatg
tatatgtattggaaaccaggaatggaaatgtttgtgtcccatgttcgtagaaagcagatt
ccctcttatgttctaccagatggttataaacgaaaccaaacaccaaggccaatgagtggg
cagctggcagagaaaccttcctctactatatgcagatcaagttccggagaaagaggtttg
aaaaggaaaaaagagcttgaaggtgcagaagagaatcaacagaaccgggacaaaaggcca
tcaattagtcctccaagaagggattcatcttcacctgaactaattgttggtcagaaaagt
ggcatgttgttacaacagcgttccgcgacagtttctggagggaatagaaaaagtgaagaa
atttcaaataattttacaaatgataaggtgcagtttgctgttctggacaaaggtgcccat
gttgaatcaactaagtcacgaggagcacaatttgaggaaagtgctgttggatccgtctac
cgtcctagtggtgtcgcaaaccttgttgaagctggtacctttggcgatccagtgcatgaa
ttgctccaactcagccacgatggccgtgctgtggacagtactggttgcaactctatctgt
tcttctcagggtgatctatacaccgcggattccaagtcactattgaataatgtatgtgaa
aatggttccagatattttgaagatgcgttgctggagttagagccaaaagctgcacgtgga
gtgttaacatctctggatagcgttggatcggaatctgtacagaaatcctctataagggtt
agcgttacgtcaacagcttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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