KEGG   Coffea arabica (coffee): 113690184
Entry
113690184         CDS       T11342                                 
Name
(RefSeq) LOW QUALITY PROTEIN: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
  KO
K12450  UDP-glucose 4,6-dehydratase [EC:4.2.1.76]
Organism
carb  Coffea arabica (coffee)
Pathway
carb00541  Biosynthesis of various nucleotide sugars
carb01100  Metabolic pathways
carb01250  Biosynthesis of nucleotide sugars
Module
carb_M01021  UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:carb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    113690184
Enzymes [BR:carb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.76  UDP-glucose 4,6-dehydratase
     113690184
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 NAD_binding_10 NmrA
Other DBs
NCBI-GeneID: 113690184
NCBI-ProteinID: XP_071907208
UniProt: A0ABM4UIW2
Position
5c:complement(44399371..44403093)
AA seq 674 aa
MATYKPENILITGAAGFIACHVANRLIRNYPRYKIVVLDKLDYCSNKKNLDPSCSSPNFK
FVKGDIASADLVNHILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGNIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNAXNQFPEKLIPKFILLAMKGQNLPIHGDGSNVRSYLYCEDVAEAFEIILHKG
EVGHVYNIGTDKERRVLDVASDICKLFSLDPNAVIKFVNNRPFNDQRYFLNHEKLNNLGW
SERTTWEEGLRKTMEWYVKNPDWWGDVSGALVPHPRMLMMPGMGKSSSDVGSIDTSSVSN
NSALKRMVNPSSKNIHHARKSSLKFLIYGRTGWIGGLLGKICDKQGIAYNYGKGRLQDRV
QLLADIQNVKPTHVLNAAGVTGRPNVDWCESHKPETISTNVVGTLTLADVCREHGLLMMN
FATGCIFEYDAGHPLGSGTGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI
SSDLNNPRNFITKIAKYDKVVNIPNSMTVLDELLPISIEMAKRNCKGIWNFTNPGVISHN
EILEMYRAYIDPKFKWTNFALEEQAKVIVAPRSNNEMDASKLKKEFPELLSIRESLIKYV
FKPNKKNLTAGTAI
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggcaacatacaagcccgagaacatccttattactggtgcagcaggctttattgcctgt
catgtggccaatagactcatccggaactatccccgttacaagattgtggttcttgacaag
cttgactactgctcaaataaaaaaaatctcgacccctcctgttcatctccaaatttcaag
ttcgtcaagggagacattgccagtgctgatcttgttaatcacattcttctcacggaatca
atcgatacaattatgcattttgcagctcagactcatgttgacaactcatttggaaacagc
tttgagttcacgaaaaacaatatttatgggactcatgtccttcttgaggcttgcaaagtc
actggaaatatcaagaggtttattcacgtcagcactgatgaggtttatggggagacagat
gaggatgctgttgttgggaatcatgaggcttctcaactcctccctacaaacccgtactct
gcaactaaagccggggctgaaatgcttgttatggcatatggaagatcatatggtttacct
gtgataactacaagaggaaacaatgccnnaaatcagttccctgagaagttaattcccaaa
ttcattcttttggcaatgaagggacagaatcttcccattcatggtgatggttccaatgta
cgcagttatctttattgtgaggatgttgcagaggcttttgaaatcattctacacaaaggt
gaagtaggccatgtctataacattgggaccgataaagagaggagagttcttgatgttgcg
agcgatatttgcaagcttttctcgttggatccgaatgcagtgatcaagtttgtcaataac
aggcccttcaatgaccagaggtactttttaaatcatgaaaagctaaataatttggggtgg
tcagagcgcactacatgggaagaaggccttagaaaaaccatggaatggtatgttaagaat
cctgattggtggggagatgtatctggtgctttggttcctcatccacggatgctgatgatg
cctggaatgggaaaaagtagttctgatgttggctctatcgatacatcttcggtctcaaac
aattctgctctgaagcgaatggtgaatccaagtagcaaaaatattcatcatgcccgaaag
tcatccttaaagttcttgatctatggtaggactggatggataggaggccttcttggaaag
atatgtgacaaacaggggatagcatacaactatggtaaagggcgacttcaagacagagta
cagctacttgcagacattcagaatgttaagccaactcatgtgctcaatgctgctggagta
actggtaggccgaatgtggattggtgcgagtctcataaaccagagaccattagtaccaat
gttgttggtactttaaccttggcagatgtttgtagagaacatgggcttctcatgatgaat
tttgccacaggatgcatatttgaatatgatgctggccacccccttggatcaggtactgga
tttaaggaagaagacaagcctaattttactggttcattctactcgaaaaccaaggccatg
gttgaagaactcttgaaagaatatgataatgtatgcacccttagagttcgaatgccaata
tcatctgatcttaataacccacgcaacttcatcacaaagattgcaaagtatgacaaagtt
gtaaacatccccaacagcatgactgtgttggatgaacttttgccaatttcaattgaaatg
gctaagaggaactgcaagggcatatggaactttactaacccaggtgttataagtcacaat
gagatattagagatgtacagggcctacattgatccaaaattcaagtggacaaatttcgcc
cttgaagaacaggccaaggttattgtagcccctcgcagtaataatgagatggatgcatcc
aagctgaaaaaggagtttcctgaattattgtccatcagggaatctctgattaagtatgtc
tttaaacccaacaagaaaaacttgactgctggaactgccatttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (13)   

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