KEGG   Coffea arabica (coffee): 113718578
Entry
113718578         CDS       T11342                                 
Name
(RefSeq) nuclear poly(A) polymerase 1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113718578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113718578
Enzymes [BR:carb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     113718578
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     113718578
SSDB
Motif
Pfam: PAP_central PAP_NTPase PAP_RNA-bind NTP_transf_2 Nrap_D2
Other DBs
NCBI-GeneID: 113718578
NCBI-ProteinID: XP_027099274
UniProt: A0A6P6V8F9
Position
11e
AA seq 620 aa
MNALIFTSGSYRLGVHGPGADIDTLCVGPMHVTRNEDFFGELHRILVEMPDVQELNSVPD
AYVPVMRFKLDGIPIDLLYASLPLPNIPEDLDISQDSIIHNVDEQTVRILNGRRVTDEIL
NLVPNIQNFRTALRCLRLWAKRRGIYSNVAGFLGGVNWAILVARICQLYPNALPCTLVSR
VFRVYNLWQWPNPVILCPIQEGSSNVWDPRRNRKDREHLMPIITPAYPCMNSSYNVSNST
LRIMMEEFRRGNEICEAIEANKAVWVTLFEPFAFFEAYKDYLQIDIKAQSGDDFRNWKGW
VESRLRFLNSMIERYTGGILQCHPYPGDFSNECRPHCCSYFMGLRRKQGSSPEGGKQFDI
RWIVDKFKHQVCQYSAWKATMWINVCHVRRKNIPVFVFSGGIRPSQRAKVAAQDCLGKRL
PGNNFLHADDAGSRKRRKQVVVNRGVHLEEFSSLTSGTSTASLQIEAGEEEQSEAVIADT
IRNKNYRKNMTNHDQEPEGSVKCRSPSCSNPKGASPVEKWVTDSSSGEIVGLSDMKTEVS
GGTVESNSFQLSMTEPGVQIPVVGAGGRNSCSKSLQNEGLEELELLPPSSIASASTSKAS
QKPLISFNFTSSKKAVGPSA
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgaatgcattgattttcacatccggttcttataggcttggggtacatggccccggagct
gatatagacaccttatgcgtgggccctatgcatgttactcgcaatgaggatttttttggg
gaattgcatagaattctggtggagatgcctgatgtgcaagagttgaattcagtgcctgat
gcttatgtccctgtcatgaggttcaaacttgatggcattcccatagatctgctttacgca
agtctaccactcccaaatatacctgaagacctggatatctctcaagattccataatacat
aatgtggatgagcagactgttcgcattttaaatgggcgcagggttactgatgaaattttg
aatttggtaccaaatatacagaattttcgaactgctctaagatgtctaagattgtgggca
aagcggcgtgggatatattcaaatgtggcaggctttcttggtggtgttaattgggcaata
cttgttgctcgcatttgccagctatatcccaatgccctgccttgcacgttagtctctcgg
gttttcagagtctataacctgtggcaatggccaaatcctgttattttatgtccaattcaa
gaaggatcttcaaatgtctgggatccaagaagaaatcggaaagacagggagcacctgatg
ccaattataactccagcatatccttgcatgaactctagctacaatgtgtcaaatagcaca
ttgcgaatcatgatggaagagtttcggaggggaaatgagatttgtgaggcaatagaggca
aacaaagctgtctgggtaactctttttgagcctttcgcattttttgaagcatacaaagat
tacttgcagatagacataaaggcacagagtggtgatgacttcagaaattggaagggttgg
gttgaatctcgattacgttttcttaattcaatgattgagagatatacagggggcattctc
caatgccatccttaccctggtgacttctcgaatgagtgtagacctcattgctgctcttat
tttatgggtttacgaagaaaacaaggtagcagtcctgaaggtggtaaacaatttgacata
cggtggattgttgataaatttaagcaccaagtatgtcagtactctgcttggaaagccaca
atgtggataaatgtatgtcatgtgaggcggaaaaacattccagtttttgtcttctctggg
ggaatccggccttcccagcgagcaaaagttgctgctcaggattgcttgggtaaaagattg
cctggaaataattttcttcatgctgatgatgctggtagcagaaagagaagaaaacaagta
gtagttaatcgtggagttcatttggaggagttttcatccctgactagtgggactagtact
gcaagcttgcagattgaagcaggagaggaagaacaatctgaagctgttattgctgacacc
atcagaaacaaaaactaccgcaagaatatgaccaaccatgatcaggaacctgaaggatct
gtaaagtgcagatcaccctcatgctcaaatccaaaaggtgcatcacctgtggaaaagtgg
gtcactgattcttcttctggggagattgttggtttgtcagatatgaagactgaagtttct
ggtggaactgtggaaagtaattcatttcagttgtccatgacggaaccaggagttcaaatt
ccagtagtaggcgctgggggtcgcaattcttgctccaaatccctacagaatgagggcttg
gaagagcttgagttgcttccaccatctagcattgcatccgcttcaacttccaaggcctct
cagaagcctcttatcagcttcaatttcacttcctcgaagaaagcagttggacccagtgct
tag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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