KEGG   Coffea arabica (coffee): 113736838
Entry
113736838         CDS       T11342                                 
Name
(RefSeq) nuclear poly(A) polymerase 3 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113736838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113736838
Enzymes [BR:carb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     113736838
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     113736838
SSDB
Motif
Pfam: PAP_NTPase PAP_central MTPAP-like_central PAP_RNA-bind NTP_transf_2 UbiA
Other DBs
NCBI-GeneID: 113736838
NCBI-ProteinID: XP_027119811
UniProt: A0A6P6WYR9
Position
3e
AA seq 565 aa
MEFETNYYSDTEGAVFWVPNQEAIHFRRVNPPLTCNSGLHINPRRPPFWPGFSPVNPLLV
GFLELGFDPDVLMKMEVQRSISLLQFMADEGLVPSPEEEIKRRNVIAKLKQIVMHWVKRV
AYQCQLPKNRVRAASATILTFGSYGLGVHNSGSDIDALCVGPYFATMAEDFFVLLHNMLA
SRPEVTEIHCIKDAKVPLMKFKFDGLSIDLPFAQLKVISVPENVDLLNPFFLRNIDDTSW
RSLSGVRANKSILQLAPNVELFQSLLRCVKLWAKRRGVYGNLHGFFGGVHFAVLAAFVCQ
RHPNASLSLLISIFFKTFAFWPWPRPVFLHGRMMAPTISSDSRFLMPIQLPCSPNEYCHS
NITRSTFFRIRTEFLRGHALTKDILRPDFSWSILFDPFPYAKKYAQFVKICLSASNQDEL
RGWVGWVKSRFRSLLVKLEELQGFCDPSPLEYVDVDLGAPNVVFYWGLQPSRRDIIDIDF
VDEDFMKNMSNGYRVPPGRMKLSVVKASQLPKSVTCNTGSKGVRARWRILDNSQRKIPVR
TNSLPQEFAGLMATNGSAEFPSAGV
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggaatttgagaccaattattatagtgatacagaaggagcagttttttgggttcccaat
caagaagccattcattttcgccgcgtgaatcctcctttaacctgcaattcagggctgcat
ataaatcctcgtcggcctccattttggcctggatttagtccagttaatccgcttttagtt
ggcttccttgagttgggatttgaccctgatgtcttaatgaaaatggaggtccagaggtca
atttccctgcttcagttcatggctgatgagggtctggtgccgtctcctgaggaagaaatc
aagagaagaaatgtcattgccaagcttaaacagatagtgatgcactgggttaaaagggtt
gcttaccagtgtcaacttcccaagaatcgagttagagctgcttctgctacaatattgaca
tttggatcttatggccttggagtccataattcaggttcagatatagatgctttatgtgta
ggcccatattttgcaacaatggcagaggactttttcgtacttcttcacaatatgcttgca
agcagacctgaagtgactgagatacactgtataaaggatgcaaaggttcctctaatgaag
tttaagtttgatgggctttcaattgatttgccttttgcacaacttaaagtaatctctgtt
cctgagaatgtggatctacttaatccattttttttgaggaacattgatgacacaagttgg
agaagtttgtctggtgtacgtgccaataaaagtattcttcagctcgcgccaaacgtcgag
ctatttcagtcgttgctgcgttgtgttaaattatgggcaaaaagacgaggagtgtatgga
aatttacatggattttttggaggtgttcattttgcagtccttgcagcatttgtttgtcaa
aggcatccaaatgccagtctgagtcttctgatctcaattttttttaagacgtttgccttt
tggccttggccaagacccgtttttctgcatggccgcatgatggcaccgactatttccagt
gactcccggtttttgatgcctatccaattaccatgtagcccaaatgaatattgccattct
aacatcacacgaagcacgttcttccggattagaaccgagttccttcgcggacatgccttg
actaaggatattctaaggcccgatttcagttggagtatcctatttgatccttttccatat
gcaaagaaatatgctcagtttgtcaaaatttgcctctcagcttctaatcaagatgagtta
cgaggatgggtgggttgggtcaaatcgcgcttccgctcacttcttgtcaagctggaagaa
ttacagggcttttgcgatcccagccctttagaatatgttgatgttgatctgggtgcccca
aatgttgtcttttattggggtttgcagcccagcaggagggatataatagacatagacttt
gtcgatgaagattttatgaagaatatgagcaatggttatcgggttcctcccggaaggatg
aagttgtcagttgtcaaagcatctcaactacctaaaagcgttacgtgcaatactggaagt
aagggagtgagggctcgctggaggattttagataacagccagcgaaagatcccagttcgc
acaaactcactacctcaggagtttgctggattgatggcgaccaatggaagtgcagaattc
cccagtgctggggtttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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