KEGG   Coffea arabica (coffee): 113742151
Entry
113742151         CDS       T11342                                 
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113742151
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113742151
Enzymes [BR:carb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     113742151
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     113742151
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 113742151
NCBI-ProteinID: XP_071903446
UniProt: A0ABM4U842
Position
4e
AA seq 754 aa
MAGPGFGNQSSGQRLGITEPISWSGPTEYDMIKTRELEKFLADVGLYESQEEAISREEVL
GRLDQIVKTWVKNVSRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAT
RDDDFFGELQRMLSEMPEVSELHPVPDAHVPVLKFKFSGISIDLLYAKLSLWVIPEDLDI
SQESILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRYWAKRRGVYSNVAGFL
GGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCEIEDGSLGLPVWDPRR
NPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTNEFQRGNEICEAMDANKCNWDKLFEL
YPFFEAYKNYLQIDVTAANAADLMNWKGWVESRLRQLTLKIERHTLNMLQCHPHPGDFSD
KSRPFYCCYFMGLQRKQGVAANEGEQFDIRLTVEEFKHAVGMYNTWKPGMEIRVCHVKRR
SIPAFVFPSGVRPRPTKVAGEGRRPSQTKVSSHTEDSSLPKALNGGSKRKRDDTDTATSL
NAKRIAGVGESGELVHEGRPSGCIGTSYLGNASLETPGKIFNEKVEDNMGNGLENPICLP
QASSQNGGESDASLRLDPSTPADSISLSSKEAEKLAIEKMMSGPYVAHQTFPQELDELED
DPEYKNQGKITGGSMKGSSMESSATKGSLIVSLTTSTAAGSRSSLQSSGKLEELEPPELL
PPASSLNSATSAPKPVLRFNFTSLAKATGESTKT
NT seq 2265 nt   +upstreamnt  +downstreamnt
atggctggccctgggtttggcaaccagagtagcgggcaacgacttggcattaccgagcca
atttcatggagtggaccaacagaatatgatatgatcaaaacccgtgagcttgaaaagttt
ttagcagatgttgggttgtacgagagccaggaggaagccatcagtagggaggaagtgctt
ggtagacttgaccagattgtaaagacatgggtgaaaaatgtaagccgtgccaagggttta
aatgagcagttggtgcaagaagcaaatgcaaagatatttacctttggctcatatcggctt
ggggtacatggtcctggggcggatatagatacactctgcgtgggacccagacacgcaaca
agagatgacgatttttttggtgagctacagagaatgctgtcagaaatgcctgaagtttca
gagctgcatcctgtacctgacgctcatgtccctgtgttgaaattcaaatttagtggaatt
tcaatagacctcctttatgcaaaattgtctctatgggttattccagaagatcttgatatc
tcacaagagtcaatactgcagaatgctgatgagcagactgtacgcagtctgaacggttgt
agagttactgatcagattttacgattagtgccaaatattcagaacttccgcacaacattg
agatgcatgaggtattgggccaagcgtcgcggtgtttattcaaatgttgcaggtttctta
ggtggtataaattgggccttgcttgttgctcgcatatgccagctttatcctaatgcattg
ccaaacatgttagtctcacggttcttcagggtctacacacagtggcgctggcctaatcca
gttatgctctgcgaaattgaagatggatcacttggactaccagtttgggatcctagaaga
aatccaaaggacaggttccacttgatgcccataataactcctgcttatccctgcatgaac
tctagctataatgtatcgtcaagcactctgcggattatgacaaatgagtttcaaagggga
aatgaaatatgtgaggccatggatgcaaacaaatgcaactgggataaactttttgaactt
tatcctttctttgaggcgtataagaattatctgcagatagatgttactgccgcaaatgct
gctgacttgatgaattggaagggctgggttgaatcccgcttgcggcaacttacattaaag
attgagaggcatactcttaacatgcttcagtgccatccacacccaggggacttctcagac
aaatcaagaccattttattgttgttactttatgggtctccaacggaaacaaggagtggct
gccaatgagggggagcagtttgatattaggttgactgttgaggaattcaagcatgctgtt
ggcatgtataacacgtggaagcctggaatggagatccgtgtatgccatgtcaaacgtcgg
agcatacctgcatttgtgtttcccagtggggttcggcctcgtcccaccaaagtagctgga
gaaggtaggcgtccttcacaaactaaagtatccagtcatactgaagatagttctcttccg
aaggcattgaatggtgggagtaaaaggaaaagggatgatactgatacagcgaccagttta
aatgcaaaacgtatagctggtgtgggggaatcaggtgagctagtgcatgagggtagacca
tctggttgcattggtacttcgtacttgggcaatgctagtttagaaacgccaggaaaaatt
tttaacgagaaggttgaagataatatgggtaatggattagaaaatcccatttgtctgcct
caggcctcttctcaaaatggtggagaatcagatgcatctttaaggcttgatccatctaca
cctgctgattccatttcattaagctccaaagaagctgaaaaacttgcaatcgaaaagatg
atgtctggtccatatgttgcacaccaaacattccctcaagaacttgatgagcttgaagat
gatcctgagtacaaaaatcaggggaaaattactggtgggagcatgaaagggagctccatg
gagtcctcagctacaaaagggtcacttatagtttctcttaccactagcacagctgctggt
tctcgctccagcttgcaatcgagtgggaaattagaagaacttgagccacctgaacttctg
cctccagcatccagtctgaattcagctacttcagcaccaaagcctgttctcaggtttaac
ttcacctccttggctaaggccactggcgaaagcactaagacctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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