KEGG   Coffea arabica (coffee): 140004526
Entry
140004526         CDS       T11342                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    140004526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    140004526
Enzymes [BR:carb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     140004526
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     140004526
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2 YutD-like
Other DBs
NCBI-GeneID: 140004526
NCBI-ProteinID: XP_071901412
UniProt: A0ABM4U2A7
Position
4c
AA seq 844 aa
MVGSDGSNGSMSPSPPQRQTRESAPKQYGVTKPLSQSGPSEADKLRTKELEKFLDDSGLY
ESAVEAVKREEVLTRLKQIVKDWVKEITRLRGYTDQMVEDANALILTFGSYRLGVHGPGA
DIDTLCVGPSYVMREDFFYVLHDILAEMEEVGELQPVPDAHVPVMKFKFDGISIDLLYAS
IDLLVVPDDLDISDVSVLHNVDEATGRSLNGCRVADHILKLVPNVKNFRTALRCLKFWAK
RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCEIED
NELGFSVWDPRKNHWDRGHHMPIITPAYPCMNSSYNVSASTLRVMMEQFQFGNKICEEIE
LNKAQWSALFEPYLFFESYKNYLQVDIIAADVDDLRAWKGWVESRLRQLTLMIERDTYGK
LQCHPYPHDYVDSSKQRAHCAFFMGLQRKPGEVIQEGQQFDIRGTVDEFRHQITMYNFWK
PGMEIYVYHVRRKQIPSYVFPEGYKRSRPSRLTNQQLGDKSSEENGEIYRSGSTERCLRR
KRELEGSENNQSSPEKRQSISPWERDSISPENGDIYRSGSTEGCLNRKRELEGSENNQVS
PEKRQSIRPQRRDSMSPDLLGVKNGIALNECSSTVLVRGMEGAEANGLCLSGSTSELLSD
NLTNGGTGIQRNERQQVEQQKEVSEELNKLNGDTLLVENGKAGYILDTSVLAHVNSELTS
KDVGSLSLAGNHDNNHGSRDGFKLQESSWVDSHKSDTKLLVNNHGENSAQLYGDELQELE
PNAAHHEVVLKSRDAVSSESVQKTVMRHVHQFLLLDSFMFICFLGHFCLYAAVCRLFYGH
FVAG
NT seq 2535 nt   +upstreamnt  +downstreamnt
atggtgggttcagatggttcgaatgggtccatgtcaccttcgccgccgcagcggcaaacg
cgggaatcggcccccaagcagtatggcgtcacaaaacccttgtctcagtctggaccctca
gaggcggataaattgagaactaaggagttggaaaagtttttggacgattctgggctatac
gagagtgctgtagaggctgtgaagagggaagaggttctaactcgactcaaacagattgtg
aaggattgggtgaaagagattactcgcttgcgaggttatactgatcagatggttgaggat
gctaatgcattgatattaacttttggttcttaccgactaggggtacacggtcctggagct
gatatagatacattatgtgttgggccatcttatgtgatgagggaggacttcttctatgtg
ctgcatgatatcttggctgagatggaagaagttggtgaattgcaaccagtaccagatgcg
catgtccccgtcatgaagttcaagtttgatggaatttcaattgatcttctttatgctagt
attgatcttttggttgtcccagatgatttggacatctctgacgtctcagttttgcataat
gttgacgaggcaactggacggagtctgaatggatgcagggtagcggatcatatacttaag
ctagttcctaatgttaagaatttccggacggctcttcgatgcttaaaattttgggcaaaa
aggcgtggtgtttattcaaatgtgactgggtttcttggtggtgtaaattgggctcttctt
gtggctcgtgtatgccagctttatccaaatgcagtacccagcatgctggtttcccgtttt
ttccgagtttacactcaatggcgctggccaaatccagttatgctttgtgaaatagaggac
aacgaacttggattctctgtttgggatcctcgaaaaaatcattgggatcgtggtcatcat
atgccaataataactcctgcttacccatgcatgaactcaagctacaatgtgtcagctagt
actctgagagttatgatggagcagttccaattcggtaacaagatatgcgaggagatcgag
ctgaataaagcccagtggagtgctctctttgagccgtatttgttttttgaaagctataaa
aactacttgcaggttgatattattgcagctgatgttgatgacctgcgggcctggaagggt
tgggttgaatctcgactaaggcagttgactctgatgatagaacgagacacatatgggaaa
ttacaatgtcatccatatccccatgactatgttgattcttcaaagcagcgtgcgcattgt
gcgttttttatgggtttgcagaggaagccaggagaggtgattcaggaaggtcagcaattt
gacatacgtggaacagttgatgagtttaggcaccagatcactatgtataatttctggaaa
ccgggcatggaaatatatgtgtatcatgtgcgtagaaaacagattccttcttatgtattt
cctgagggttacaaacgaagtcgaccttcaaggcttacaaatcagcagctgggtgataaa
tcatctgaagaaaatggagagatttacaggtctggatctactgaaagatgtctaagaagg
aaaagggaacttgaagggtcggagaacaatcaatcgagtcccgagaaaaggcagtcaatt
agtccttgggagagggattcgatatctcctgaaaacggagatatttacaggtcaggatct
actgaaggatgtctaaacaggaaaagggaacttgaaggatcagagaacaatcaagtgagt
cccgagaaaaggcagtcaattagacctcagcggcgggattcgatgtctcctgatctcctt
ggtgtaaaaaatggcattgcactgaatgagtgctcgtcgacagtgcttgtgagggggatg
gaaggtgctgaagccaatggactctgcctgagtggaagcacctcagaattgctttcagac
aatttgacaaatggaggcactggcatacaaaggaatgagaggcaacaggttgagcagcag
aaagaggtctctgaagagttgaataagctgaatggtgatacgcttttagtggagaatggt
aaagctggatatatcttagacaccagtgtattagcccatgtaaacagtgaactcaccagc
aaggatgttggatctctgtctcttgcaggtaaccatgacaacaaccatggaagtcgtgat
gggtttaaactccaggaatcttcatgggttgattctcacaaatcagataccaagttgctt
gtgaacaatcatggggaaaatagtgcacagttatatggagatgaattgcaggagttagag
ccaaatgctgcccatcatgaagtggtgctgaagtccagggatgcagtcagctcggagtct
gttcagaaaacagtgatgaggcatgttcatcagtttttgttacttgattcctttatgttt
atatgttttctgggccatttttgtctttatgctgctgtttgtcggttgttttatggccat
tttgtagccggttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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