KEGG   Cercocebus atys (sooty mangabey): 105579572
Entry
105579572         CDS       T07242                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
caty  Cercocebus atys (sooty mangabey)
Pathway
caty03013  Nucleocytoplasmic transport
caty03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:caty00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105579572 (CASC3)
   03015 mRNA surveillance pathway
    105579572 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caty03019]
    105579572 (CASC3)
Messenger RNA biogenesis [BR:caty03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105579572 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 105579572
NCBI-ProteinID: XP_011901884
Ensembl: ENSCATG00000033593
Position
Unknown
AA seq 713 aa
MADRRRQRASQDTEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQRGGRIGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNSSTKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQGLGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPMEAGGQHGGRSGETVKHETSYRSRRLEQTPVR
DPSPEAADVPVLGSPEKEEATSETPAAAPDTAPPAPDRPIEKKSYSRARRTRTKVGDAVK
LAEEVPPPPEGLIPAPPVPETTPTPPTKTGNWDAPVDSTTGGLEQDVAQLNIAEQNWSPG
QPSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVH
ISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMLVQPEMHLPHPGKFSVSACMLPVPEDI
CWEHHKPYPPEFCAASLGVWPSWLRWQQIPLVSILRTSILSLIILSSPARPSYENDVTLF
FSFFLLLIQVYIPTRHQLLCPIQASIPHQCPCLQDSHHLSSCLLLLTFLLQAS
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcagcgcgcttcgcaagacaccgaggacgaggaatctggtgct
tcgggctcagacagcggcggctccccgttgcggggcggcgggagctgcagcggtagcgcc
ggaggtggcggcagcggctctctgccttcacagcgcggaggccgaatcggggcccttcat
ttgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggagtgtgagagtgaa
gatggcattgaaggtgatgctgttctctcggattatgaaagtgcagaagactcagaaggt
gaagaaggagaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagctaat
gatgctgttaattcttcaacaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcaaagtggggacggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatccagca
tacatacctcggaaagggctcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgagcaggccccaaagtcccgacaggagctcattgctctttat
ggttatgacattcgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
ccccgatatgggagtcctccacaaagagatccaaattggaatggtgagcggctaaacaag
tctcatcgccaccagggtcttgggggtaccctaccaccaaggacatttattaacagaaat
gctgcaggtactggccgcatgtctgcacccaggaattattctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctatggaagctggggggcagcacggtggccggtctggc
gagactgttaagcatgagactagttaccggtcacggcgcctagagcagactcctgtgagg
gatccatctccagaagcagcagatgttccagtgcttggcagtcctgagaaggaagaggca
acctcagagacaccagctgctgctcctgatactgcaccaccagcccctgacaggcccatt
gagaagaaatcctattcccgggcaagaagaacccgaaccaaagttggagatgcagtcaag
cttgcagaggaggtgccccctcctcctgaaggactgatcccagcacctccagtcccagaa
accaccccaactccacctactaagactgggaactgggacgctccagtggattctactaca
ggtggacttgagcaagatgtggcacaactaaatatagcagaacagaattggagtccgggg
cagccttctttcctgcaaccacgggaacttcgaggtatgcccaaccatattcacatggga
gcaggacctccacctcagtttaaccggatggaagaaatgggcgtccagggtggtcgagcc
aaacgctattcatcccagcggcaaagacctgtgccagagccccccgcccctccagtgcat
atcagtatcatggagggacattactatgatccactgcagttccagggaccaatctatacc
catggtgacagccctgccccgctgcctccacagggcatgcttgtgcagccagaaatgcac
cttccccacccaggtaagtttagtgtctctgcttgtatgcttccagtacctgaggatata
tgttgggagcaccacaaaccctatcctcctgagttctgtgctgctagcctgggagtctgg
ccatcctggctgcgttggcaacaaattcctcttgtatccatcctgaggacttccatcctg
agcctgattatactgagcagtccagccaggccatcctatgaaaatgatgttactttattt
ttcagtttttttcttctccttatccaggtttacatccccaccagacaccagctcctctgc
ccaatccaggcctctatcccccaccagtgtccatgtctccaggacagccaccacctcagc
agttgcttgctcctacttacttttctgctccaggcgtcatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system