KEGG   Ciconia boyciana (Oriental stork): 140657122
Entry
140657122         CDS       T10948                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
cboy  Ciconia boyciana (Oriental stork)
Pathway
cboy04010  MAPK signaling pathway
cboy04020  Calcium signaling pathway
cboy04510  Focal adhesion
cboy04518  Integrin signaling
cboy04519  Cadherin signaling
cboy04540  Gap junction
cboy04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:cboy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    140657122 (PDGFRB)
   04020 Calcium signaling pathway
    140657122 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    140657122 (PDGFRB)
   04519 Cadherin signaling
    140657122 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    140657122 (PDGFRB)
   04540 Gap junction
    140657122 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    140657122 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:cboy01001]
    140657122 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:cboy04090]
    140657122 (PDGFRB)
Enzymes [BR:cboy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     140657122 (PDGFRB)
Protein kinases [BR:cboy01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   140657122 (PDGFRB)
CD molecules [BR:cboy04090]
 Proteins
  140657122 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig VEGFR1-3_N_Ig-like Ig_2 Ig_VEGFR-1-like_5th V-set VEGFR-1-like_Ig-like C2-set_2 BACON_2
Other DBs
NCBI-GeneID: 140657122
NCBI-ProteinID: XP_072729804
Position
9:complement(6919867..6954544)
AA seq 1169 aa
MACPRITVLERGRGKISTRAGGEERMVMESWDFTSAAARLMLSEGGCSEDTFIYSLSFTS
VLSALPRFSHQATEPAMLSPSLKTSLWLLILTGLLEVTSGGSGLHIEPGDAELVLGLHST
FSLLCYGDAALVWEREGQSLAASLEHRDGVFLSNLTLRNVTGHHTGEYACTYSPDQAPEP
AERKALYIYVPDPSLVFLPTITSEEVFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPI
PAAYDPQQGFKGFFEDKTYFCRTIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTIVRQGE
NITLMCTVSGNELVNFDWDYPRKQAGKAVEPVTDFLPGSTHEIRSILTIQNVELEDSGTY
VCNVSEGYHEKTDRKDITVQVIERGFVRFHTRLPSMVYAEVHKSHTIQVEVEAYPQPSIM
WLKNNKTLTMESSSEFTITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSF
HLQINVPAKVVDLKENSSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLG
NESAEIGLQTNTTYHAELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHAL
PFKVVIISVILALLVLTVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLP
YDSSWEVPRDKLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQAL
MSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKA
RREAEVYGNTAKEDHVQSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSN
YGTPYELDSYSPSAPERTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLA
ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWS
FGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIR
PSFSQLVVLMGNLLVDCYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNTRLTPSSPASS
ILYTAVHQNGGENDYIIPLPDPKPEAICDLPQEASISRASSTLNEANTSSTISCDSPLGL
RQDEEQESDPQPGCQELTTGHQEVEESFL
NT seq 3510 nt   +upstreamnt  +downstreamnt
atggcttgccctcgcatcacggtgctggagaggggcagagggaagatctctactcgtgct
ggtggggaggagaggatggtgatggagagctgggacttcacctcggcggctgcaaggttg
atgctctctgagggtgggtgcagtgaggacacattcatttacagcctgagtttcacctcg
gtcctttcagctcttccccgattcagccaccaagccacagagcccgccatgctgagcccc
tctctgaagacatctctctggctcctcatcctcaccggtctgctggaggtaacgtctggg
ggcagcgggctgcacatcgaacccggagatgctgagcttgtcctcggcctccacagcacc
ttctccctcttgtgctatggggacgccgccctggtctgggaacgggagggtcagtccctc
gccgcctcgctggagcacagggatggtgtcttcctcagcaatctcaccctcaggaacgtg
acgggccatcacaccggggagtacgcgtgcacctacagccctgaccaggctccagagcca
gcggagaggaaagccctgtacatctacgttccagatccctccctggtcttcctccccaca
atcacctccgaagaggtcttcatcttcatcacgggctacacagaggccgtcatcccatgt
cgtgtgaccaacccgcagatgcaggtgaccctctatgagaaaaaggtggagaaccccatc
ccagctgcttatgacccacaacaggggttcaaaggcttctttgaggataagacctatttc
tgccggacaattgtggatgaccaggaggtggattcagacaccttctatgtctacaggatc
caggtctcatctgtgaacgtctccatcagcgcagtgcagaccatagtgcgtcagggagaa
aacattaccctgatgtgcactgtgagcggcaatgagctagtcaacttcgactgggattat
ccccgcaagcaagcagggaaggctgtggagccggtgaccgacttcctgcctggatccacc
catgagatccgctccatcctcaccatccagaatgtggagctggaggacagcgggacctat
gtctgcaacgtctctgagggctaccatgagaaaacagatcggaaagacatcacggtccaa
gtgatcgagcgtggcttcgtgcgcttccacacccgcctgcccagcatggtgtacgctgag
gtccacaagagccacaccatccaggtggaggtggaagcctacccgcaacccagcatcatg
tggttgaagaacaacaagacgttgaccatggagagcagcagcgagttcaccatcaccagc
aggaacctgtcagaaaccaggtaccagacggctctggtgctggtgcgggtgaagcaggaa
gaaggaggattttacaccatccgggcttccaatgaggacgatgagcaggagctgtccttc
catctgcagataaatgtgccagctaaagtggtggatctcaaggagaacagcagtgccagc
agtggggagcagaccgtaacatgctctgctgaaggcatgccccagccagagatcagctgg
tctacttgcagcgacataaaatggtgcagcaccaaggggcagcccacccggctgctgggg
aacgagtctgcagagattggtctgcagaccaacaccacgtaccatgcggagctgcaggtg
taccgcgtgaacagcaccctgcagctgcacagggtggacgagcccctgctcctgagatgc
actgtgcaaaacttcctgggcaccaactcccaggacatcactctggtcccacacgccttg
ccgttcaaagtggtcatcatctctgtcatcctggccttgctggtcctcaccgtcatctcc
ctgatcatcctgattgtcctgtggcagaagaaacctcgttatgaaatccgctggaaggtg
attgagtcagtcagctccgatgggcacgagtacatctacgtggatcccatgcagctccct
tacgactccagctgggaggtgcccagggacaagctggtgttaggacgcactcttggctcc
ggtgcctttggacgcgtggtggaggcaacagcccacggcctgagccattcgcagtccacc
atgaaagtagcagtcaaaatgctcaagtccactgcccgaagcagcgagaagcaagccctc
atgtccgagctgaagatcatgagccacttgggacctcacctcaacatcgtcaacttgctg
ggggcctgcaccaaaggagggcccatctatatcatcaccgagtactgccgctatggggat
ctggtggactacctgcaccgcaacaagcataccttcctgcagtcctacggagagaaggca
cggcgagaggcagaggtgtacgggaacactgccaaggaggatcacgtgcagagtcacctc
tccttgtctgtggagagcgacgggggctacatggacatgagcaaggatgactccctggat
tatgtgcccatgtccgacatgaagggtgaagtcaagtatgctgacatcgagtcctctaac
tatggcaccccgtatgagctggacagctattccccatcagctcctgaaagaacagaccgg
gtgacgctgataaacgagtctccgctcctcagctacatggacttggtgggcttcagcttc
caggtggccaatgggatggagttcctggcttccaaaaactgtgtgcatcgtgacctggct
gccaggaacgtcctcatctgcgaggggaagctggtgaagatctgtgactttggcctggcg
agagacatcatgagggattccaactatatctccaaaggcagcaccttcttgccccttaag
tggatggctccagagagcatcttcaacaatctctataccaccctgagcgatgtgtggtcc
tttgggattctcctctgggagatattcactctaggggggactccataccccgaactgcct
atgaacgaacagttctacaacgccatcaaacgtggctatcggatgtccaaacccacccac
gcctctgatgaaatctacgatatcatgcagaagtgctgggaggagaagtttgagatcaga
ccatccttctcacagctggtggtgcttatgggaaacctcttggtggattgctacagaaag
aggtaccagcaggtggatgaagagttcatgaagagtgaccaccctgctgttgtccgcaca
agacccacaatccctgggctgaacaacaccaggctcactcccagctcccccgccagcagc
attctctacacagccgtgcaccagaacgggggcgagaacgattatatcatccctcttcct
gaccctaaacccgaggcaatctgcgatctccctcaggaggcctccatcagccgggccagc
tctacactgaatgaggccaacacatcgtctacaatatcctgtgacagccctctgggcctc
cggcaagacgaggagcaggaatccgacccacagccaggctgccaggagctgaccacaggg
caccaagaggtggaggagagtttcctgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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