KEGG   Caenorhabditis briggsae (nematode): CBG_23248
Entry
CBG_23248         CDS       T01054                                 
Symbol
Cbr-hmp-1
Name
(RefSeq) Protein CBR-HMP-1
  KO
K05691  catenin alpha
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04519  Cadherin signaling
cbr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    CBG_23248 (Cbr-hmp-1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    CBG_23248 (Cbr-hmp-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cbr04812]
    CBG_23248 (Cbr-hmp-1)
Cytoskeleton proteins [BR:cbr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     CBG_23248 (Cbr-hmp-1)
SSDB
Motif
Pfam: Vinculin UPF0688
Other DBs
NCBI-GeneID: 8578552
NCBI-ProteinID: XP_002636557
WormBase: CBG23248
UniProt: A8Y4D2
Position
V
AA seq 917 aa
MHANGDTEINFNRIRSKAVLKQVTQMINEVTNITETFPLAQGQTAEGLVDTVDAALVNFL
ESGHFVVSKCPIANKDPRSIEALREALRFVQDKGQIMVQRSRDFVRDSTSTEKRKVATLS
GRSLLVAVAEFLILADSIDVKTIVDKVDELRDTVHRMLEADSKIEVDEQYKILVSLIEEL
DITVRRRAVDLVKPNQRDDLLAARSALRQIAPLLFTSQRTFVRHPEHEEAQKNRAYTAKE
MNSALNALEAVLNGQQPEIIFSEYGRIGDLIDKIETFQNKIELERPGDYKGHLTRRELEG
LVEEIVSGSASIADSGSTRDTRKQKIVDECNNLRQALQDLLSEYEKSVGQRQFTDDIPLG
IAQVHKRTKDLRRHLRRAIVDHISDAFLDTRTPLILLIESAKEGHEENTKYRAQMFQEHA
NEIVEVARFSCQLSADKEGISVIQLTASQLERLAPQVSQSALLLCAEPSSKQAQENMESY
KNMWFEKVGLLTTALDNITTLDDFLAVSEAHIVEDCERGIKGILENASTPEDNAANCGVV
DCAAGSIRGRALRVCDVVDAEMDFLRNSEYTETVKQAVKILRTQRVDEFAERASNLAYRQ
EATGLTWDADQKDNEMNEFINACTLVHDAVKDIRHALLMNRSMNDVDSDVEYEVEGTNAG
NSDANRTIPEQENQQNLMRRLPEEEKQKIQAQIDIFRVTQNRFEREVAKWDETGNDIITL
ANNMCKIMMSMTEFTRGCGPLKTTMDVIRAAQEISLNGSKLNVLAKQISDASVDSRTKED
LLSYLPKITLYCQQLNICSKVKADITQIGNEMVVSALDSAMSLIQTARNLLDTVVQTVKA
AYIASTKIGRKLNIEWRMAPPKKQPLVRPQKNSAIIRRASERRPLQPAKVLAEFTRNDIE
SGDFELNNQKRRVNGYS
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgcacgccaatggcgacactgaaataaacttcaataggattcggtccaaagccgtgctg
aaacaagtcactcagatgatcaatgaagtgacaaatataacagagacgtttccattggca
caaggacaaaccgcagaaggactcgttgatacagttgatgcggctcttgtgaattttctt
gaaagcggacattttgttgtttcaaaatgcccaatcgccaataaagacccccgttccatc
gaggcattgcgagaagctctccgatttgtgcaagataaaggtcaaatcatggtgcaacga
agcagagattttgttagagattcaacgtccacggaaaaacggaaagttgcaactttatca
ggaagaagtctgcttgttgccgttgccgagttcctgattctcgctgattcgatcgatgtg
aaaacaattgttgataaagtcgatgagcttcgtgatacagtacacagaatgctcgaagct
gattccaaaattgaagtagatgagcaatacaaaattctcgtctctttaattgaagaactc
gacattactgttcggcggagagcagttgatttggtgaaaccaaatcagcgagatgattta
ttggctgctcgatctgcccttcgccagattgctccactattgtttacatctcaaagaact
ttcgtacggcatccagaacacgaagaagctcagaaaaatcgagcttacactgcgaaagaa
atgaactcggcattgaatgctctagaagctgttctcaacggacaacaacctgaaatcata
ttctcagagtatggaagaattggagatttgatcgacaaaattgaaacgttccaaaataaa
atcgaattggaaaggccaggagactataaaggacatctgacacgtcgagagctggaagga
cttgtggaagaaatcgttagcggatctgcatcgatcgctgattctggaagtactcgtgac
acacgaaaacagaagatcgtcgacgaatgcaacaatttgagacaagcacttcaagacttg
ttatccgagtacgagaaatctgttggacagaggcaattcacggatgatatacctcttgga
atcgctcaagttcacaaaagaacaaaagatcttcgacgacaccttcgccgtgcaattgtg
gatcatatcagtgatgctttcctcgacacccgaactcctttaattctactaatcgagtcc
gcgaaagaaggtcatgaagagaacacaaagtatcgcgcacaaatgttccaagagcatgcc
aacgagatcgtagaagtcgcccggttttcttgtcaactttctgctgataaggagggaatc
agtgtgattcaacttacggcttctcaacttgaacgactcgctccgcaagtttcacaatca
gctctattgctgtgcgccgagccatcttcgaaacaagctcaagaaaatatggaatcttat
aaaaatatgtggttcgagaaagttggtctcctcacgactgcgctggacaacatcacaact
ttggacgattttctcgctgtcagtgaggctcatattgttgaagactgtgagagaggaata
aagggtattctggaaaacgcctcaacaccggaagataatgcagccaattgtggagtcgta
gattgcgcggctggatcgattcgtggacgagcactcagagtctgcgatgttgtggacgca
gaaatggatttccttcgaaattcggaatacacagaaaccgtcaaacaagccgttaaaatt
ctccgtactcaacgagtggatgagttcgcagaacgtgccagcaatttggcttatcggcaa
gaagcgaccggtctcacttgggatgccgatcagaaggataatgaaatgaatgaatttata
aacgcatgcactttggtacacgacgctgtgaaggatattcgacatgctcttctgatgaat
cgtagcatgaacgatgttgattctgatgtagaatacgaggttgaaggtacgaatgctgga
aattcagacgccaaccgaacgataccagaacaagaaaatcagcaaaatttgatgagacgt
ttaccagaggaagagaaacagaagatccaggctcaaatcgacatcttcagagtcacacaa
aatcggttcgagagagaagttgcaaagtgggatgaaactggaaatgatattataacactg
gcaaacaatatgtgcaagattatgatgagtatgacagagttcaccagaggatgcggtcca
ctgaagacaacgatggatgtcattcgggcggctcaagaaatctcattgaatggttctaaa
ctgaatgtgttggccaagcagatttcagatgcaagtgtagattcgagaacgaaagaagac
ttgctttcatatttaccaaagatcactttgtattgccaacaattgaatatttgtagtaag
gtgaaagctgatataacccaaattggaaatgagatggttgtttctgcattggattcggcc
atgtctctcattcaaactgctcgaaatcttctggatactgttgttcagacagtcaaagcc
gcatatattgccagtactaagatcggacgtaagctgaacatcgaatggcgaatggctcct
ccaaagaagcagccactagttcgaccacagaaaaacagtgctatcattagacgggcatcc
gaacgaagacctctgcaaccagccaaagtgctcgccgaatttacgcgtaacgatatcgaa
tcgggtgactttgaactgaataaccagaaacgaagagttaacggttattcctaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   WORMBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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