KEGG   Castor canadensis (American beaver): 109693530
Entry
109693530         CDS       T04791                                 
Symbol
Tubb
Name
(RefSeq) tubulin beta chain
  KO
K07375  tubulin beta
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04145  Phagocytosis
ccan04517  IgSF CAM signaling
ccan04540  Gap junction
ccan04814  Motor proteins
ccan05010  Alzheimer disease
ccan05012  Parkinson disease
ccan05014  Amyotrophic lateral sclerosis
ccan05016  Huntington disease
ccan05020  Prion disease
ccan05022  Pathways of neurodegeneration - multiple diseases
ccan05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    109693530 (Tubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    109693530 (Tubb)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    109693530 (Tubb)
  09142 Cell motility
   04814 Motor proteins
    109693530 (Tubb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109693530 (Tubb)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    109693530 (Tubb)
   05012 Parkinson disease
    109693530 (Tubb)
   05014 Amyotrophic lateral sclerosis
    109693530 (Tubb)
   05016 Huntington disease
    109693530 (Tubb)
   05020 Prion disease
    109693530 (Tubb)
   05022 Pathways of neurodegeneration - multiple diseases
    109693530 (Tubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccan03036]
    109693530 (Tubb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ccan04812]
    109693530 (Tubb)
   04147 Exosome [BR:ccan04147]
    109693530 (Tubb)
Chromosome and associated proteins [BR:ccan03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     109693530 (Tubb)
Cytoskeleton proteins [BR:ccan04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    109693530 (Tubb)
Exosome [BR:ccan04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109693530 (Tubb)
  Exosomal proteins of colorectal cancer cells
   109693530 (Tubb)
  Exosomal proteins of bladder cancer cells
   109693530 (Tubb)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 109693530
NCBI-ProteinID: XP_020030468
UniProt: A0A8B7VFP4
Position
Unknown
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEEDFGEEAEEEA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcacatccaggccggtcagtgtggcaaccagatcggtgccaagttc
tgggaagtgatcagcgatgaacacggcattgaccctaccggtacctaccacggagacagc
gacctacagctggaccgcatttctgtgtactacaatgaagccacaggtggcaaatatgtt
cctcgtgccatcttggtggatctagaacctggaaccatggactctgttcgctcgggtcct
tttggtcagattttcagaccagacaactttgtttttggtcagtctggggcaggcaacaac
tgggcaaagggccactatacagaaggggctgagctggttgactcagtcctggatgttgtg
cggaaagaggcagagagctgtgactgcctgcaaggcttccagctgacccactcattgggt
gggggcacaggctccggaatgggcaccctcctcattagcaagatccgtgaagagtatcct
gaccgaatcatgaacaccttcagtgtagtgccgtcacccaaagtgtctgacaccgtggtt
gagccctataatgccaccctctctgtccatcagttggtagagaacactgatgagacctac
tgcattgacaacgaggccctttatgacatctgcttccgcaccctcaagctgaccacacca
acctacggggatctaaaccatctcgtctcagccactatgagcggtgtcaccacctgcctc
cgcttccctggccagctcaatgctgacctccgcaagctggcagtcaacatggtgcccttc
ccacgcctccacttcttcatgcctggcttcgcccctctcaccagccgcggaagccagcag
tatcgggctctcactgtgcctgaactcacccagcaggtctttgatgccaagaacatgatg
gctgcctgtgacccccgccacggccggtacctcactgtggctgctgtcttccgtgggcgg
atgtctatgaaggaggtggatgagcagatgctcaatgtgcagaacaagaacagcagctac
ttcgtggagtggatccccaacaacgtcaagacagctgtctgcgacatcccacctcgtggt
ctcaagatggcagttaccttcattggcaacagcacagccatccaggagctcttcaagcgc
atctcagagcagttcactgccatgttccgccggaaggccttcctccattggtacacaggt
gaaggcatggacgagatggagttcaccgaggctgagagcaacatgaatgacctcgtctct
gagtatcagcagtaccaggatgctaccgcagaagaggaagaagatttcggtgaggaggct
gaagaggaagcctaa

  All links  
Gene (501)   
   RefGene (498)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (510)   

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