KEGG   Cynara cardunculus var. scolymus (artichoke): 112512175
Entry
112512175         CDS       T05604                                 
Name
(RefSeq) tubulin beta-2 chain-like
  KO
K07375  tubulin beta
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04145  Phagosome
ccav04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112512175
  09142 Cell motility
   04814 Motor proteins
    112512175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccav03036]
    112512175
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ccav04812]
    112512175
   04147 Exosome [BR:ccav04147]
    112512175
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112512175
Cytoskeleton proteins [BR:ccav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112512175
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112512175
  Exosomal proteins of colorectal cancer cells
   112512175
  Exosomal proteins of bladder cancer cells
   112512175
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 112512175
NCBI-ProteinID: XP_024973805
Position
LG 5:4969699..4972512
AA seq 445 aa
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDVTGKYTGDSELQLERINVYYNEASGGRFV
PRAVLMDLEPGTMDSLRSGAYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAIYRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGEYEEEEEYDEA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagagagatcctccacattcaaggtggtcaatgcggaaaccagatcggagctaagttc
tgggaggttgtgtgtgctgagcatgggattgatgtcaccgggaagtataccggagattct
gagcttcagctcgagaggatcaatgtttattacaatgaggctagcggcggtaggtttgtt
ccacgagcggtgctcatggatctggagccagggacgatggacagtcttagatctggagct
tatgggcagatcttcaggcctgataactttgtgtttggtcagtctggtgctggtaataat
tgggccaagggacattatactgaaggtgctgagttgatcgattcggttctggatgttgtt
aggaaggaggctgagaattgtgattgcttacaaggtttccaggtctgccattctcttgga
ggtggcacagggtctgggatgggaactcttttaatttcaaagatcagggaagagtatcca
gacagaatgatgatgactttctctgtattcccatctccaaaggtttcagatactgttgtg
gagccttacaatgccaccttatctgttcaccaacttgttgaaaatgccgatgaatgtatg
gttcttgataacgaggcattgtatgatatttgctttcgaacactcaagctgacgacccca
agttttggtgatctaaaccatcttatttccgccacaatgtctggagtcacctgctgtcta
aggtttcctgggcaactcaactctgatctccggaaacttgctgtgaatctcatcccattc
ccgcgtctccatttcttcatggttggtttcgctcctctcacatcacgtggatcccagcaa
taccgtgccctcactgtccctgaactcactcaacaaatgtgggatgccaagaacatgatg
tgtgctgctgacccacgacatggccgttacttgacggcatctgccatttaccgtggaaag
atgagcaccaaagaagtcgacgagcagatgctaaacgtccaaaacaagaactcgtcatac
tttgtggagtggatcccgaacaacgtgaagtccaccgtctgtgatatcccaccaacaggt
ctaaagatggcatcaaccttcatcgggaactcaacatccatccaagaaatgttcaggcgt
gtgagtgaacagttcactgccatgttccgcagaaaggctttcttgcattggtacaccggt
gaaggtatggatgagatggagttcactgaggctgaaagcaacatgaacgatctcgtttcc
gagtatcagcagtaccaggatgcaacagctgatgaggagggagagtatgaggaagaagag
gagtacgatgaagcttaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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