KEGG   Cynara cardunculus var. scolymus (artichoke): 112513210
Entry
112513210         CDS       T05604                                 
Name
(RefSeq) proline--tRNA ligase, cytoplasmic-like isoform X1
  KO
K01881  prolyl-tRNA synthetase [EC:6.1.1.15]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    112513210
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccav01007]
    112513210
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112513210
Enzymes [BR:ccav01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.15  proline---tRNA ligase
     112513210
Amino acid related enzymes [BR:ccav01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   112513210
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    112513210
 Prokaryotic type
    112513210
SSDB
Motif
Pfam: ProRS-C_1 tRNA-synt_2b HGTP_anticodon
Other DBs
NCBI-GeneID: 112513210
NCBI-ProteinID: XP_024975172
Position
LG 5:5781265..5787821
AA seq 528 aa
MPRNLLLLPNLVVGVFLNSFLFLSSASSIIHIHSADEGRKKETGLGLTNTKDGNFGEWYS
EVVTNGEMIEYYEISGCYILRPWTMSIWEIMQTFFDAEIKKMKIKTCYFPLFVSNNVLQK
EKDHIEGFAPEVAWVTRSGDSDLEVPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCN
VVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADTEVLEILELYRRLYEEYLAVPVVKGK
KSEMEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAKMFEINFEDEKGEKAMVWQN
SWAYSTRTIGVMVMTHGDDRGLVLPPKVAAIQVIVIHVPYKDADIKEILSACSATVKVLC
DLGIRAEADLRENYSPGWKYSHWEMKGVPLRIEIGPKDLANNQVRAVRRDNAAKIDIPMD
GLVDKVKCMLDDIQQNMFNVAKQKRDACVQVAKTWDEFIEALSQKKLILAPWCDEEEVEK
DVKTKTKGETGAAKTLCSPFDQPQLPEGTLCFASGKPAKKWTYWGRSY
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgccaagaaatctgctgttgttgccaaatctagtagtgggtgtttttttaaactcattt
ctgtttttgagctcagcttcttccatcatacacatacactctgcagatgagggaaggaaa
aaggagacaggtctgggtcttacaaatactaaagacggcaactttggggaatggtattct
gaggttgttacaaatggtgaaatgatagaatattatgaaatatccggctgttacattctc
cggccatggacaatgtccatttgggagataatgcaaaccttctttgatgcagaaattaag
aagatgaagattaaaacttgctattttccgctttttgtatccaataacgttctacaaaag
gagaaggatcacatagagggttttgctcctgaggttgcttgggtcacgagatcaggtgac
tctgatttggaagtccctattgccattcgcccaactagtgaaaccgtcatgtacccctat
ttctctaagtggatcaggggacaccgtgacttgcctttaaaacttaaccaatggtgcaat
gttgtccgatgggagttcagtaatcctactccatttatcaggagccgtgaatttctttgg
caagaagggcacactgcctttgcaacaaaggaggaggcagacactgaggttcttgaaatc
cttgaactgtataggcgtctatatgaggagtacttggctgtacctgttgtgaaagggaaa
aaaagcgagatggagaagtttgccggtggactttatactactagtgtcgaggcctttatt
ccaaataccggtcgtggtgttcaaggtgcaacttcacattgcttgggccagaattttgct
aagatgttcgagattaattttgaagatgagaagggagaaaaggctatggtctggcagaat
tcctgggcatacagtactagaacgattggggtgatggtgatgacccatggggatgatagg
ggcctggtgttaccccctaaagttgccgcaatacaagttattgtgattcatgtgccttac
aaagatgcagatattaaggaaatattaagtgcatgttcagccaccgtaaaagttttatgt
gatttaggtattcgtgccgaagcggacctcagagagaattattcacctggttggaagtat
tctcattgggaaatgaaaggtgttcccctgaggattgagataggaccgaaagacctggcc
aataaccaggtgcgtgctgttcgtcgtgacaatgcagcaaaaattgatattcctatggac
ggtttggttgataaagtaaagtgtatgctggatgatattcagcaaaacatgtttaatgtt
gctaagcaaaaacgagatgcctgtgttcaagttgcgaaaacttgggatgaattcattgaa
gcattaagccaaaagaaattgatcttggctccatggtgcgatgaagaggaagtggagaag
gatgtgaaaacaaagacaaaaggggagacaggagctgctaagacgctttgttctccattt
gaccagcctcaactgcctgaaggtacattgtgctttgcatcggggaaacctgccaagaaa
tggacgtactggggacggagttattaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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