KEGG T05604: 112515550

Cynara cardunculus var. scolymus (artichoke): 112515550

Entry

112515550         CDS       T05604

Name

(RefSeq) nucleolar protein 6

K14544

U3 small nucleolar RNA-associated protein 22

Organism

ccav Cynara cardunculus var. scolymus (artichoke)

Pathway

ccav03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:ccav00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112515550
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccav03009]
    112515550
Ribosome biogenesis [BR:ccav03009]
Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    112515550

SSDB

Motif

Pfam:

Nrap_D5 Nrap_D4 Nrap_D2 Nrap Nrap_D3 Nrap_D6

Other DBs

NCBI-GeneID:

112515550

NCBI-ProteinID:

XP_024978203

Position

LG 7:6781137..6793672

AA seq 1047 aa
MAASEEYTDTMNLKVAELMKEVQLDYSSATAKTIDDAVSSIKECVNKIPEDIKVTADLAP
KFIRDIGADKVEFKFKRPKSIQIGGSYSFQCAVKPDVNVDLYVRLPKECFHEKDFLNHRY
HGKRCLYLCIIKKYLESSSVAKKVEWSFFQNEARKPILVVYPVVKSAGLPGFAIRLIPTA
DSLFNVQKLNMERNNLHVLSQGVSQATPVYNNSLLEDMYMENGAEFVRKAFSGWKALGEA
LILLKVWARQRSSLHTCDSLNGYLISIIMAYLASESGKARINTTMTAMQIFRLTLDFMAT
SKLWGSGIFFKPQGGSDMSKEERKRYVQYFPAVICDLSAHFNVAYRMTKSGLIELQDEAA
LALRCIDKCKEGGFVELFMTKIDFPAKFDYCMRLNLKRKAEVSAQGLCLDNECWRLYEKK
VHSLLQEGLGDRAKFVRVTWGNATSTCDINHGLTVLDKEPLMVGVSVNLPEAFDEYTRGP
FFGNKEEGLKFRKFWGNKAELYQFKSGTRECVFWECKPAKRYLIIKWVTEYVLKRHLSLA
EETIMHAVDQLDFSLVHDGGDLASDGSLLESFGTLSKRLRLLSDVPLGVSSVQPLDSAFR
HTSVFPPRPHPCANGTKVGNRIRPTCIQPLEIMIQLEGSGNWPMDDLAIEKTKSAFLLRI
GECLQKDYGMKYCPSEEGVDVFLNGYVFRLKILHERGLDLLNGQPDSYQVKRVSPTDKHL
FLRSQHSSMINGLSGRYPLYGPVVQLAKRWVAAHLFSASFTEEAIELVVASLFHNPLPFS
APCSRIAGFTRFLRLLSEHDWTFTPLIVDINEDMTPDDEKEIDEKFTLSRKAYEEGTGGV
TSAMYLATAYDKASEAWTSTSPSVSEVKRLAVYARSSSNLLTKLIMQGQLDSYGWECIFR
TPLNNYDAVILLHRDKLSYPQRLLFPSELNHGKLVAQGNASKIFHPFLLPNGVTGTRKDL
EDQLYINFDPLMCYVKRLENAYPNRFKLWYDSLGGDAIGLTWEKENLKKRRREDVKKNVK
ITLRDVGEVGKGFVKSIYLLKAPRLAD

NT seq 3144 nt +upstreamnt +downstreamnt
atggctgcttccgaggagtatacagacaccatgaacttaaaggtcgcagagctaatgaag
gaagtccagctcgattactcctctgcaactgctaaaaccattgatgatgctgtatcatct
atcaaagaatgcgtcaataaaattcctgaagatataaaggttacggcggatttggcaccg
aaatttattagagatatcggtgcagacaaagttgagttcaagttcaaacgacctaagtcg
attcaaattggtggaagttattcgtttcaatgtgccgtgaaacctgatgtaaatgttgat
ctttacgttcggttgccgaaggagtgcttccatgagaaagactttttgaatcatcgatac
catggcaaaagatgcctgtatctctgcataatcaagaagtatttggagtcttcttctgta
gcaaaaaaagtagaatggtccttctttcagaacgaggccaggaaacctattcttgttgta
tatcctgttgtgaagtctgctgggcttccagggtttgctattaggttgattccaacagca
gattcccttttcaatgtccaaaagttgaatatggagcgcaacaatcttcatgttttgagt
caaggtgtttctcaagctacccctgtgtacaacaacagtttgttagaggacatgtatatg
gagaatggtgcagaatttgtcagaaaggcttttagtggatggaaggccttgggagaggct
ttaattttgctgaaagtgtgggctcgacagagaagttctctacacacttgtgactcctta
aatgggtaccttatctcaatcataatggcataccttgcctctgaatctggtaaagctcgc
attaacacaacaatgacggcaatgcagatttttcgtcttactttggactttatggccacc
tctaagctatggggaagtgggatatttttcaagcctcaaggaggaagcgatatgtctaag
gaggaaaggaagagatatgtacagtattttccggcagttatatgtgatttatcagctcat
ttcaatgtagcataccgcatgacaaagagtggtttgattgagcttcaagacgaggctgct
ttggcactcaggtgtattgataaatgtaaagagggggggtttgttgagctatttatgacc
aagattgattttcctgctaagtttgactattgcatgaggttgaacttgaagaggaaggct
gaagtttctgcacaagggttatgtttggataatgagtgttggagactgtatgaaaagaag
gtgcattctttgcttcaggaaggcttaggagacagagcaaagtttgtacgtgtaacctgg
gggaacgcaacatccacatgcgatatcaatcatggtctgacagtgctcgacaaagagcca
ctaatggttggagtttctgtcaacttgccagaagcctttgacgagtatacgaggggtccc
ttttttgggaataaagaagagggtctgaagttccgaaagttttggggaaacaaggcagag
ttgtaccaatttaaaagtggtaccagggaatgtgttttttgggaatgcaagcctgcaaag
agatatcttattataaaatgggtcactgagtatgtgcttaagcggcatctatcattggca
gaggaaactatcatgcatgctgttgatcaacttgatttttcattggttcatgatggtgga
gatctggcttctgatggaagtttgctcgaaagttttggtactctgtctaagcgtttacgt
cttctcagtgacgttcctttgggagtctccagtgtacagcctctggactcagctttccga
cacacatctgtctttcctccaagacctcatccctgtgctaatggaactaaagttggaaat
agaatcagaccaacctgtatacagccgctggaaattatgattcagttggaaggttcgggg
aactggccgatggatgatctagcaattgagaaaactaaatctgcttttctgctaagaatt
ggagaatgccttcagaaggattacgggatgaaatattgtccgtcagaggaaggtgtggat
gttttcttgaacggatatgtgttccgcttgaaaattttgcatgagagaggcctcgacttg
ttaaatggacaacctgatagttaccaagtaaaaagggtttcccctacagacaaacatctt
tttctgagaagtcagcattctagcatgattaatggcctttccggtcgctatccattatat
ggcccagttgttcaattggcaaaacgatgggttgctgcacatctcttctcagcttctttc
acggaggaggcaattgagcttgtggttgcatctctttttcataaccccttgccattttct
gctccttgttcacgaattgccggttttacaaggtttttgagactactatcggagcatgac
tggacatttactcctttgattgttgatataaacgaggatatgacgccagatgatgaaaag
gaaattgatgaaaaatttactttgagtagaaaagcttatgaagaagggacaggaggtgta
acgtctgccatgtacttagccactgcttatgataaggcatctgaagcctggactagcacg
tctccaagcgtatcagaggtcaaaaggttggcagtctatgctagaagcagttcaaacttg
ctgactaaactcattatgcaaggtcagctagattcttatggatgggagtgcatttttcga
accccattgaacaactatgatgctgtcattcttcttcatagagacaaactctcttaccct
caacgtcttctcttcccatctgaactcaatcatgggaagcttgtggcacagggaaatgca
agcaagatttttcatccttttttgttgcctaatggtgtcactggtaccagaaaggatctt
gaagatcagttatatatcaacttcgatccattgatgtgctatgttaaacgtttggagaat
gcttatcccaacaggttcaagttgtggtatgattctttaggaggtgatgcaattggactt
acatgggaaaaagagaacttgaagaaaaggagacgagaagatgtaaagaaaaacgtgaag
attactttgagagatgtgggtgaagttggaaaaggatttgtgaagagcatttatttgctg
aaggcgccaaggcttgcagattaa

All links

Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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