KEGG   Cynara cardunculus var. scolymus (artichoke): 112516718
Entry
112516718         CDS       T05604                                 
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
  KO
K14487  auxin responsive GH3 gene family
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    112516718
SSDB
Motif
Pfam: GH3 GH3_C GH3_M AIG2_2
Other DBs
NCBI-GeneID: 112516718
NCBI-ProteinID: XP_024979689
Position
LG 8:complement(20548546..20550905)
AA seq 595 aa
MAVDALCSPLGPPACEKDAKALQFIEEMTRNADAVQENVLAEILCRNSQTEYLRLHNLGG
ATDRETFKSKIPMVTYEDLQPIIERIANGDRSPILSSHPISEFLTSSGTSAGERKLMPTI
REELDRRQLLYSLLMPVMNLYMPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSDH
FKTRSFDPYNVYTSPNEAILCPDSFQSMYSQMLCGLYERQQVLRLGAIFASGLLRAIRFL
QLNWRVLAHDIRTGTLNAKIFDSDIRRCMTQVLRSDPELADFIESECSKDNWERIITRIW
PNTKYLEVIVTGAMAQYIPTLDYYSGGLPKVCTMYASSECYFGLNLNPMCKPSEVSYTIM
PNMAYFEFLPHDPNSQSGATGDKLVDLVNVQVGKEYELVITTYAGLCRYRVGDILRVTGF
HNSAPQFHFVRRKNVLLSIDSDKTDEAELQTAVDNASKLLNEFNTSVVEYTSYADTKTIP
GHYVIYWELLVKDSANFPRDDVLEGCCLAMEESMNSVYRQGRVECNSIGALEIRVVKNGT
FEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSSHFSQSLPHWTPERRR
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggcggttgatgctctgtgttcaccgttgggaccgccggcatgtgagaaagatgcgaaa
gcgcttcaattcatcgaggagatgacaagaaacgccgacgccgttcaggagaatgtgctg
gcggagatactttgtcggaattctcagacggagtatctccgacttcacaatctcggtggc
gctaccgatcgagaaactttcaagtccaagattccgatggtaacttatgaagatcttcaa
ccgatcatcgaacgcatcgccaatggcgatcgatctccaattctatcttctcatccgatt
tctgaattcctgactagctctggtacctccgctggtgaacgaaaactgatgccgacgatt
cgagaagagttggatagacgtcaactactttacagtcttctaatgcctgtcatgaacctg
tacatgcctggtttagataagggaaagggactctactttttgtttgtcaagtccgaaaca
aagactcctggtgggttattggccagacccgttttaaccagctactacaaaagcgaccat
ttcaagacccgatcttttgacccgtataacgtctacaccagccccaacgaagctattctt
tgccccgactcctttcagagcatgtactcacagatgttgtgcggcctttacgagcgtcaa
caagtcctccgccttggtgccatcttcgcctccggtctcctccgtgccatccgctttctc
cagctcaattggcgggtactcgcccatgatatccgaactggaacactcaacgccaaaatt
ttcgattccgatatccggcgatgcatgacacaggtgttaagatctgacccggaactcgcc
gattttatcgaatccgaatgctccaaagacaactgggaaagaattattacgcgaatttgg
cccaacaccaagtatttagaggtgatcgttaccggcgccatggctcaatacattccgacg
ctcgattattacagcggcgggttacccaaagtttgcaccatgtatgcttcatccgagtgt
tatttcggactcaatctgaaccccatgtgtaaaccgtcggaagtttcatacaccatcatg
ccaaacatggcgtacttcgagttcctcccacacgacccaaattctcaaagtggcgccacc
ggtgacaaactggtggatcttgtaaacgtacaagtcggaaaagaatacgaactggtgatc
accacttacgccggtctatgccggtaccgtgtcggcgacatcctccgagtcaccggattc
cacaactccgctccacagttccatttcgtgagacgaaaaaacgtattgctgagcatcgac
tccgataaaaccgacgaggcggagttacagaccgccgtcgacaatgcatcaaaattgttg
aacgaattcaacacgagcgtggtggaatacacaagttacgcagatacgaaaacaatccca
ggtcattacgtgatatactgggaattattagtcaaagattcagccaattttccaagagac
gatgtgctggaagggtgctgtttagccatggaagaatcgatgaactccgtgtaccgacag
ggtcgggttgaatgcaattcaatcggggcgttggagatccgagtagtgaaaaacggtacg
tttgaggaattgatggattatgcgatctcgagaggggcatcaatcaaccagtacaaggtg
ccacggtgcgtaaactttacaccaatcatggaactgcttgactccagagtggtatcatcg
catttcagtcaaagcctgcctcattggactcccgaacgacgtcgttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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