KEGG   Cynara cardunculus var. scolymus (artichoke): 112517009
Entry
112517009         CDS       T05604                                 
Name
(RefSeq) uncharacterized protein LOC112517009 isoform X1
  KO
K00703  starch synthase [EC:2.4.1.21]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500  Starch and sucrose metabolism
ccav01100  Metabolic pathways
ccav01110  Biosynthesis of secondary metabolites
Module
ccav_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    112517009
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ccav01003]
    112517009
Enzymes [BR:ccav01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.21  starch synthase (glycosyl-transferring)
     112517009
Glycosyltransferases [BR:ccav01003]
 Polysaccharide
  Storage polysaccharide
   112517009
SSDB
Motif
Pfam: Glyco_transf_5 Glycos_transf_1 Glyco_trans_1_4 Glyco_transf_4 GT4-conflict Glyco_trans_4_4
Other DBs
NCBI-GeneID: 112517009
NCBI-ProteinID: XP_024980066
Position
LG 8:7531454..7546455
AA seq 613 aa
MDVLSIAVSPSVFGNFPTKISDCFSFPVRKRKKANNRRFLFDSANRFPNRFSLDPKIQAI
HLDEVGADKPESITGLRLKDVDWPSPSDEIPFWKREFNTWDANSEVPVHIEKDSDLLHAI
HVTAEMAPIAKVGGLGDVVTGLARACLLRGHKVEIMLPFYECIQKGNIQELSLMSTYNSY
NDGNWIQTNAYRGIVSGIPVILIEPMNQFFKGDDVYRGSYNELEAYLFFSRACLEWMQVT
GTQPDIIHVHEWQTGALPLLYWDMYHYLSLQKPRIVLTIHNMEHYGECRQEQLHKCGLDG
SVYASIDKAIDDRTIGHNPERLSLLKGGIVYSNSVVTVSPTYLNETLCSGWLASALITNR
DKYHGILNGIDTVMWNPACDVFLPANYHAQNTSGKKVCKQYLQKGLGLALEGNASNNHLS
DRVPLVVCISRLVAQKGLHLIRHAINHIEEQGGQMIILGKAPDSRVEREFEALANLHNKG
STVRILLMYSEELSHMLYAAADMVVVPSIYEPCGLAQMIGMRYGSVPIVRKTGGLADTVF
DMSDQSQPEMANGFVFEGIDEGSLCRALDRSFSYYREQPIEWENIVQKIMQIDNSWNKTA
GKYIDVYNSIRVR
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggatgtcttgagtattgctgtcagtccttcagtatttgggaatttcccaactaaaata
tcagattgcttctctttcccagttcgaaagaggaagaaggctaacaaccggaggtttttg
ttcgattctgcgaatcgtttccctaatcgcttttcactcgatcctaaaattcaagcaatt
catctggacgaggtaggtgctgacaagccagaatccataactggtttaagattaaaagat
gttgactggccttctccaagtgatgaaatcccattttggaagagggagttcaacacttgg
gatgccaattcagaggttcctgttcacatagaaaaagattctgatcttttgcatgctatt
catgtgactgctgaaatggcaccaatagcaaaagttggtggtcttggtgatgttgtaact
gggctagctcgtgcatgtttattacgtggacataaagttgaaattatgcttcctttctat
gagtgtatccagaaggggaatatccaagaattatctctgatgtctacatataattcatat
aacgatgggaactggatccaaactaatgcataccgtggaatagtttcgggcattccagtg
atacttattgaaccaatgaaccaattctttaagggagatgatgtatatagaggttcatac
aatgagttggaggcttatttattcttcagccgtgcttgtcttgaatggatgcaggtaaca
ggaacacaacctgatatcatacatgtccatgaatggcagacaggtgcactgccgctccta
tactgggacatgtaccactatctttcacttcagaaaccaagaatagtattgacaattcac
aacatggagcattatggggagtgcagacaagagcagcttcataagtgtggtcttgatgga
tctgtatatgcctctattgacaaggcaattgatgatcgaaccattgggcacaatccggag
aggctgagtttattgaaagggggcattgtgtacagcaattcagtagttacagtctctcct
acttacctcaacgaaacactttgttctggatggcttgcaagtgctttgataacaaatcgt
gacaagtaccatggtattcttaatgggattgatactgttatgtggaaccctgcttgtgat
gttttcttgcctgccaactatcatgctcagaacacctctggaaagaaagtatgcaagcaa
tatctccaaaaggggcttggtttggctttagaaggcaatgcgtccaataaccacttatct
gacagggtacctttagttgtttgcattagtcgattggttgctcaaaaaggtcttcatcta
attaggcatgcgatcaatcatattgaagaacaaggtggacaaatgattattctgggaaaa
gctcccgatagtagggtagaaagagaatttgaagctctagctaatttgcataacaaaggc
tctacggttcgtatcctattgatgtatagcgaggagctgtcgcatatgttgtatgctgct
gcggatatggtggtggttccttctatatatgagccatgtggccttgctcagatgattgga
atgcgttatggatcggtgccgatagtaaggaaaactggtggccttgccgacactgttttt
gatatgagtgatcagtcgcagcctgagatggctaatgggtttgtctttgaaggaattgat
gaaggttccctatgtcgggctctagatcgttcattttcgtattaccgggaacaaccaatc
gagtgggagaatatcgtacagaaaattatgcaaatcgacaacagctggaacaaaacagca
gggaagtacattgatgtatacaactcgatacgagtgagatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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