KEGG   Cynara cardunculus var. scolymus (artichoke): 112518272
Entry
112518272         CDS       T05604                                 
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03440  Homologous recombination
ccav03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    112518272
   03460 Fanconi anemia pathway
    112518272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccav03032]
    112518272
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112518272
Enzymes [BR:ccav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     112518272
DNA replication proteins [BR:ccav03032]
 Eukaryotic type
  DNA Topoisomerases
   112518272
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     112518272
   FA (Fanconi anemia) pathway
     112518272
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_TOP3B Toprim
Other DBs
NCBI-GeneID: 112518272
NCBI-ProteinID: XP_024981681
Position
LG 1:25968502..25981503
AA seq 875 aa
MATKVLMVAEKPSIALSIATALSGGRMSSRRGSTEVHEFDGTFLGYRVQYKVTSVIGHVF
RFDFNISYYLHFFFCKSSVDFPPAYQDWAATDPLSLFQAPVVKSESNPKAHIRQHLNREA
RGCGDLVLWLDCDREGENICFEVIECTGFANDGRRVHRARFSSVTEKDIIHAMKNLVEPN
KDEALAVDARQEIDLKVGVAFTRFQTTYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLH
ISTFKPEKFWVVLPYIIKNGFELKLEWNRNRLFDHDVAEMFQKLVAEDAVVKVISTSEKQ
ESKGRPSGLNTVNLLKVASSALGFGPHLAMQLAERLYTQGFISYPRTESTAYPSSYDFKG
TLGTLVSNSVWGSYVQTLLSNGYHKPRSGTDVGDHPPITPMRSANEDMLGGDAWRLYQYV
CQHFLGTLSPDCKYVRKKIEFSVGGEFFHCVGQHVTVKGFTAIMPWLAVPEKNLPQFTEG
EKIEISKVELYEGKTAPPDYLSESELISLMEKHGIGTDASIPVHINNISERNYVKVEAGR
RLVPTVLGVSLIRGYQCIDADLCLPDIRGFIEQQITLVSKGQADHSLVVQHVLEQFKQKF
NYFIKQIENMDALFEAQFSPLSDSGRSLSKCGKCLRYMKYIAMLPSRLYCNTCEEVYYVP
QKGTIKLYKELTCPLDNFELLLFSMAGPDGKSFPLCPYCYNNPPFEGIDTLFGAPKTGGS
VKLGKGVGMPCFLCPHPTCRHSLISQGVCACPECDGTLVLDPVSAPKWRLYCNICNCLVL
LPQGAHRISTTKERCPECDSTIIEVDFNKKTTPLKDGATLHVGCILCDELLHSLVEMKHG
KSFFRRGRGRGRGRGRGRGRRGGRNQDPKMSFRDF
NT seq 2628 nt   +upstreamnt  +downstreamnt
atggcgaccaaagtactcatggttgcggaaaagccaagcatcgctctttcaattgctaca
gcactgtccggtggtcgaatgtcatcacgaaggggtagtacggaggttcatgagtttgat
ggtacatttttagggtaccgggtacaatataaagtgacatcagtgattggtcatgttttc
aggtttgactttaacatatcttactatctacacttctttttctgcaaatctagtgtagat
tttccaccagcttatcaagactgggcagccacagatcctctcagtctttttcaagctcca
gttgtcaagtcagaatcaaacccgaaggctcatattcgtcaacatctaaaccgggaggct
cgtggttgtggagatctggtactgtggttggactgtgatcgtgaaggagaaaatatatgc
tttgaagttatcgagtgcacgggatttgccaatgatggtagaagagttcatcgtgcacga
ttttcttctgtgacggagaaagacattatccatgctatgaaaaatcttgttgagcccaac
aaagacgaggcattggctgtagatgctcggcaagaaatagatctgaaagttggagttgca
tttacacgatttcagactacttatttccaaggaaaatatggaaatctggattctagggtt
atctcatatggcccatgtcaaacccctacccttggattttgtgtgcagcgctaccttcac
attagtactttcaagccagaaaagttttgggttgtgcttccttacataataaagaatggt
tttgagctaaagctggaatggaatcgtaataggttgtttgatcatgatgtggcagagatg
tttcaaaagttagtagcagaagatgcagttgtgaaagttatcagtacgtcagaaaaacaa
gagagcaaaggtcgcccttctggtcttaatacggtgaatcttttgaaggttgcttcaagt
gcactagggtttggacctcacctggccatgcaattggctgagcgcttgtatacccaaggt
tttatcagctatccacggacagagagtacggcatacccttcatcatatgactttaaagga
actcttgggactttggtgagtaattcagtatggggtagttatgtccagacactgctcagc
aatggttatcataaaccccgatcaggaactgatgtaggtgaccacccgccaattactcct
atgcgatcagctaatgaagatatgctaggtggagatgcctggagactttatcagtatgtt
tgtcaacattttcttggtaccctgtctcctgactgcaaatacgtaaggaaaaagatcgag
ttttctgtgggtggagaattcttccattgtgttgggcagcacgtcacagtgaaaggattt
acagcaataatgccatggttggcagtgccggagaaaaatctacctcagtttacagaaggg
gagaaaatagagatttcaaaggttgagctatatgagggtaaaactgcgcctccagattac
ctgtctgagagtgagctgatctctctaatggaaaagcatggaataggaacagatgcatcc
attcctgttcacattaacaacataagtgaacggaactacgtgaaggtagaggctggaaga
aggttggttccaacggttttgggtgttagtcttataagaggatatcaatgtatagatgca
gatctttgtttgcccgacatacgaggtttcatagagcagcagatcactctcgtttctaaa
ggtcaagcagatcattcgcttgttgtgcagcatgtacttgaacaatttaaacagaagttt
aactactttattaagcagattgaaaatatggacgcattgtttgaagcacaattttctcct
ctttcagactctggacgttcacttagtaaatgtggaaaatgcttacgatatatgaagtac
atcgctatgcttccatcacggctatactgtaatacatgtgaggaagtctattatgttcct
caaaagggcacaattaagctgtacaaagaactaacatgtcctctggacaactttgagctt
ttgctgttttccatggctggaccagatggcaagtcattccctctttgcccttattgttac
aacaatcctccatttgaaggtatagacacattatttggtgcccccaaaactggtggttcg
gtcaagttgggaaagggcgttgggatgccttgttttctctgcccacaccctacgtgccgc
cattccttgatatctcaaggggtgtgtgcctgcccagagtgtgacgggaccctcgttctt
gacccggtcagcgctcccaaatggaggctttattgcaacatatgcaattgtcttgttttg
cttccccaaggtgctcatcggataagcacaaccaaggaaaggtgtcctgaatgcgactcc
accataatagaagtggactttaataagaaaacaacacctttgaaggatggagctacactt
catgttggatgtattctttgtgatgagttgcttcattcgctcgtggaaatgaagcatggg
aagtcattctttagacgtggcagagggagaggaagaggtaggggaagaggcagaggacga
cgaggtggtaggaaccaagaccccaaaatgagctttcgagatttctga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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