KEGG   Cynara cardunculus var. scolymus (artichoke): 112519372
Entry
112519372         CDS       T05604                                 
Name
(RefSeq) EIN3-binding F-box protein 1-like
  KO
K14515  EIN3-binding F-box protein
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04016  MAPK signaling pathway - plant
ccav04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    112519372
   04075 Plant hormone signal transduction
    112519372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112519372
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     112519372
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like LRR_At1g61320_AtMIF1 F-box LRR_NXF1-5
Other DBs
NCBI-GeneID: 112519372
NCBI-ProteinID: XP_024983213
Position
LG 10:complement(28408221..28411700)
AA seq 657 aa
MQKLFGEDVLCHGMPKYQNSEESNLFLSLGHHVDVYFPPRKRSRVTAPFVFCGEMFKKQQ
TTIDVLPDECLFEIFRRVSGSQEKSACASVSKRWLMLLSTIRKDEICFDLKTQPEAPEVA
VPVAPASFIKKDGLYSSLEIVEDDNSGGCLTRSLKGKKATDVRLAAIGVGSGSRGGLSQL
AVLGNNASKVTDCGLKAVARGCPTLTSLTLWNLSSIGDEGLVEIANECPLLENLDLSQCP
QISDKSLFAIANKCPNLTSLAIESCSNIGNDGLQAIGRSCLNLKSISIKNCILVGDQGIS
SLVSSATCSLMKVRLYGLTISDVSLAVIGHYGMALTDLSLGGLRNVTEKGFWVMGSGQGL
QKLNSFIISSCGGVTDLGLKAVGRGCPNLKEFSVRKSGFVSDNGIVSFAKAAVSLETLLL
EECNEITQLGIFGLLVNCGKLKTLSLAKCLGIKDLPMTVPLTFSPCNSLRSFSIRNCPGF
GNFSLALLGRVCHQLEHVVLNGLHGITDVGLTSLVQNSEAGLTKVDLSGCVNISDKIVSE
ISMVHGGTLEVLNLDSCRLITDASVVAIAENCLLLRELDVSKSAITDFAIAALACAEQLN
LQILSVSRCSQVSNKSIPFLKKLGETLVGLNIMQCGGITSNAVGLLEEQIWKCDILV
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgcagaagctatttggggaagatgttctttgccatggcatgccaaaataccagaattcc
gaagagtcgaatctcttcttgtcccttggtcatcatgtcgacgtctacttcccacctcga
aagaggtcacgagtcactgctccctttgtgttctgtggagaaatgttcaagaagcagcag
accaccattgatgtccttcccgatgaatgtctcttcgagattttcagacgggtatctgga
agtcaagagaaaagcgcatgtgcttctgtttcgaagcgttggcttatgctattaagcacc
attcgcaaagacgagatctgttttgacctaaagactcaaccggaagcacctgaagtagct
gtgcctgttgcccctgcctcatttatcaagaaagatggactttattcctctctggaaatt
gtcgaagatgataacagtggtgggtgtctcacaaggtctctaaaagggaagaaggctaca
gacgttagacttgcagctattggtgttggatcaggtagtcgtggaggattgagtcaactc
gctgttcttggaaacaatgctagtaaggtgacggattgtggactcaaggccgttgctcgt
ggttgtcctactcttacatcccttaccttgtggaatctatcttcgattggagacgagggt
cttgtcgaaattgctaatgagtgtcccctgttggagaatcttgatctttctcaatgccct
caaatttccgacaaatctttgttcgccattgcaaacaagtgtcctaatctgacatcacta
gcaatagaatcttgctcgaatattgggaatgatggccttcaagcaatcggtcgaagctgt
cttaacttgaagtcgatttcaatcaaaaactgcattctagttggagatcaagggatttct
agtttggtttcatcagcaacttgttccttgatgaaagtaaggctttacggtttaaccatc
agcgatgtgtctcttgctgttattggacactatggtatggcattgaccgacttaagttta
ggtggtcttcgtaacgtaaccgaaaagggcttttgggttatgggcagtggtcaaggcttg
cagaagttgaattcatttataatcagctcttgtggtggtgttactgatctcgggctcaaa
gcagtgggcagaggctgtccgaatttgaaggaattttctgtacgtaaatctgggttcgta
tcagataatggtatcgtgtcatttgctaaggccgcagtgtctctagagacacttttacta
gaagaatgcaacgagattacacaacttggaatcttcggattgcttgtaaattgtggtaaa
ttgaagacactctctttggcgaagtgtttaggaattaaggacttgcctatgacggttcct
ttgactttttctccttgcaattcactgagatcgttctccatccgtaactgccctggattt
ggaaactttagcttggctttgttgggtagggtttgccaccagcttgagcatgtggttttg
aatgggcttcacggaattacagatgtgggtcttacttcactcgttcagaactccgaggct
ggtctaaccaaggtcgatcttagcggctgtgtgaacatttccgacaagattgtttcagaa
atctctatggtccatggtgggacactggaggtattgaatcttgacagttgcagattgatc
accgatgcaagcgtggtcgccattgcggaaaactgcttattgcttcgggaactcgatgtt
tccaaatcagcaatcaccgatttcgcaattgcagccttggcttgtgctgaacaactgaat
cttcagattctctccgtctccagatgcagtcaagtgtcgaacaagagcataccgttcttg
aaaaagttgggcgaaaccctcgttggtctgaacatcatgcaatgtggtggaatcaccagt
aacgcggttggtcttctggaagagcaaatttggaagtgtgacattctcgtttaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (12)   

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