KEGG   Cynara cardunculus var. scolymus (artichoke): 112520624
Entry
112520624         CDS       T05604                                 
Name
(RefSeq) transcription factor HY5
  KO
K16241  transcription factor HY5
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    112520624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccav03000]
    112520624
Transcription factors [BR:ccav03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   Plant bZIP factors
    112520624
SSDB
Motif
Pfam: bZIP_1 bZIP_2 bZIP_Maf FlaC_arch GIT_CC TSC22 WH_MCM2
Other DBs
NCBI-GeneID: 112520624
NCBI-ProteinID: XP_024984794
Position
LG 11:8662380..8665886
AA seq 153 aa
MQEQAATSSVAASLPSSSERSSSSALQVEVKEGMESDDEIRRVPDMGGEAAGASGGSVAH
PDRVQGTTEGTRRKGKSPADKENKRLKRLLRNRVSAQQARERKKAYLLELEVRVKELEKK
NSEVEERLSTLQNENQMLRHILKNTTAGMQERK
NT seq 462 nt   +upstreamnt  +downstreamnt
atgcaagagcaagcagcaacgagttccgtggcggcgagtctaccttcaagtagtgagaga
tcttcaagctctgctcttcaagtggaagtcaaagaaggaatggagagtgatgatgagatc
agaagagtgccggatatgggtggtgaagctgctggagcatcgggcggatccgttgcacat
ccagaccgtgttcaaggtacaaccgaaggtacgaggaggaaagggaaaagtccggccgac
aaagaaaacaagcggttgaagaggttgttgaggaatcgagtttcggctcaacaagcaagg
gagagaaagaaggcatacttgttggagttggaggtgcgagtgaaagagttggagaagaaa
aattctgaggttgaagagcgtttgtcgacgctgcaaaacgagaaccagatgcttagacat
atcttgaagaacacaacggctggtatgcaagagaggaaatag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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