KEGG   Cynara cardunculus var. scolymus (artichoke): 112521502
Entry
112521502         CDS       T05604                                 
Name
(RefSeq) EIN3-binding F-box protein 1-like
  KO
K14515  EIN3-binding F-box protein
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04016  MAPK signaling pathway - plant
ccav04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    112521502
   04075 Plant hormone signal transduction
    112521502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112521502
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     112521502
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box-like LRR_At5g56370 LRR_RPS2 F-box
Other DBs
NCBI-GeneID: 112521502
NCBI-ProteinID: XP_024986169
Position
LG 11:8789787..8793649
AA seq 629 aa
MQKLVGYSGEGDFSHRKSMYTNPMDLGIFSSLGHHVEVYSLPCKRSRISAPFVFSGEVCK
KQKTTIEVLPDECLFEIFRRLGGNKERSSCASVSKHWLMLLSTIHRDEISKDSEKESIPS
DGHLSRCLEGKKVTDVRLAAIAVGSAGHGGLGKLSIHGNNVVRGVTNFGLTAVARGCPSL
TDLSLWNLSSISDEGLVEIASGCHRLEKLDLCQIPAISNKSLMAIANNCPNLTELSIESC
SNIGNEGLEAISRSCHNLKSISIKNCFLVGDRGIASLLSSASYSLKKVNLQALSLSDLSL
AVIGHYGIALTALVLAGLPKVTEKGFWVMGNGQGLQKLRSLIITSCSGVTDLGLEAVGKG
CPNLKQFCLRKCSLLSDNGVTSFAKSALSIENVLLEECNRVTECGVFSLLVNCSSNMKSL
TLENCFGIKDLAPQIPFSRCNAFRSLSVRNCPGFGNNSLVLLGNLCPQLQHVEFTGLHGI
TNEGFTPLIRCCEAGLVKVNLSGSMNLTDNMVSEITKVHGETLEILNLDGCRSVTDASLV
AIAFNCLKLSELDVSGCTITDSGIAALACAIQLNLQILSISRCRLVSDKSLPYFAKLGVG
GLNLQNCDGISNPAVSHLVNRLWHCDILS
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgcagaaactcgtcggttacagtggggagggtgatttttctcatcggaagtcaatgtac
acaaatccaatggatttgggtattttctcttctcttggacatcatgttgaggtgtattcc
ttaccttgcaagagatctagaatcagtgctccatttgtattcagtggggaagtttgtaag
aaacagaaaaccaccattgaagtgcttcctgatgaatgcctgtttgagatttttagacgc
ctcggtggaaacaaagaaaggagctcatgtgcttctgtctcgaagcactggcttatgctt
ttaagcaccatccatagggatgagattagcaaggattcagagaaagaatcaatccccagc
gatgggcacctctcgaggtgcctagaagggaaaaaggttacagatgtcagacttgcagcg
attgctgttggatccgctggtcatggagggctcggaaaactttccatccatggaaacaat
gttgttcgtggggtgaccaactttggactcacggcggtcgctcgtggttgcccttctctt
acggatctttccttgtggaatctatcatccatttcagatgaaggccttgttgaaatcgct
agtgggtgtcatcggttggaaaagcttgatctttgtcaaataccagcaatttccaacaag
tctttgatggctattgcaaacaactgccctaacctcacggaactatcgatagaatcttgc
tcaaacatcggcaacgaaggccttgaagcgatcagtcgaagctgccataacttgaagtct
atttcgataaagaactgctttctagttggagatcgaggaattgcaagtttgttgtcatca
gcaagttattccttgaagaaagtaaatctacaggctttaagtctcagtgatttatcgctt
gctgttatcggacactacgggattgcacttacagccttagttcttgctggtcttcctaag
gtaaccgagaagggcttctgggttatgggcaatggtcaaggtttgcagaagttgagatcc
ttaataattacctcctgctccggagtcactgatctggggcttgaagcagtgggcaaaggt
tgcccgaatctgaagcaattttgccttaggaaatgttcgctcttatctgacaatggagta
acgtcttttgctaaatcggcactttcaatcgagaatgtgctgctagaagaatgcaacagg
gtcacagaatgtggtgtttttagtctgctcgtaaactgcagtagcaacatgaaaagtctt
actttagaaaactgtttcgggattaaggatttggctccgcaaattcctttctctcgttgc
aacgccttccgatctttatccgttcgtaactgtcccggattcggaaataacagcttggta
ttgttaggtaatctttgccctcaacttcaacacgtggaattcaccgggcttcatggaatt
accaacgagggcttcacccctctcatccggtgctgtgaggctggtctagttaaagtcaac
cttagtgggtccatgaatctgaccgataacatggtatccgaaataactaaggtgcatggc
gaaacactcgagattctaaatcttgatggttgcagatccgtgaccgatgcaagcttggtg
gccattgcattcaactgcttaaagctcagtgaacttgatgtttctggatgcacaatcacc
gactcaggcattgcagccttggcatgtgcgatacaactgaatctgcagattctttcgatc
tcaagatgccgtctagtatcagacaagagcttgccttactttgcgaaactaggggttggt
ggtttaaatctccagaattgtgatggaatcagcaatcctgcagttagtcatttagtgaac
cgcctctggcactgcgatatcctttcctaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (11)   

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