KEGG   Cynara cardunculus var. scolymus (artichoke): 112524175
Entry
112524175         CDS       T05604                                 
Name
(RefSeq) probable cysteine protease RD19D
  KO
K01373  cathepsin F [EC:3.4.22.41]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04142  Lysosome
ccav04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    112524175
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    112524175
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccav01002]
    112524175
Enzymes [BR:ccav01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.41  cathepsin F
     112524175
Peptidases and inhibitors [BR:ccav01002]
 Cysteine peptidases
  Family C1: papain family
   112524175
SSDB
Motif
Pfam: Peptidase_C1 Inhibitor_I29 Peptidase_C1_2 DXP_synthase_N
Other DBs
NCBI-GeneID: 112524175
NCBI-ProteinID: XP_024989646
Position
LG 13:10031810..10035302
AA seq 378 aa
MGRRASPETTMGGGGVLAYAAVLTVLTCAIHAVHATPHDPIIVQVTDHPNNHLIGTPTEH
RFTAFIQEHGKQYSTREEYLHRLGVFSKNLLRAAEHQLLDPTAVHGVTPFSDLSEEEFET
MFMGVKGGGIDRKSNDVGTAAPPMEVKDLPDDFDWREKGAVTEVKMQGSCGACWXFSTTG
VIEGANFIATGKLLTLSEQQLVDCDHMCDPXEEDACDSGCSGGLMTNAYNYLIKAGGIES
EESYPYTGKSGKCKFDAEKIAVKVSNFTSITGDEDQMAAHLVKHGPLAVGLNAVFMQTYI
GGVSCPLICSKRRVNHGVLLVGYGSKGFSILRLGNKPYWIIKNSWGKRWGENGYYRLCRG
QGMCGMDTMVSEVITAKS
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgggaaggagagcttcgccggaaacaacaatgggaggaggaggtgttctagcatacgcc
gctgttttgaccgtgctaacatgcgcaattcacgccgttcatgcaacacctcacgatcct
atcatagtccaagtcactgaccatccgaacaaccacctcattggaactccgacggaacac
cggttcacggcgttcatacaagaacacgggaagcagtactctactcgagaggagtacctg
caccgcctcggtgtattttcgaagaatctccttagagctgccgaacaccaattgctggat
ccaacggcggttcatggcgttacgccgttctcagatctatcagaggaggagttcgaaact
atgtttatgggcgtgaaaggcggtggaattgatcggaaaagcaacgacgtaggaacagct
gcaccgcctatggaggtcaaggatttgcctgatgatttcgattggagagagaaaggtgcc
gttaccgaggttaagatgcagggttcgtgtggggcatgttgggyattcagtacgacgggg
gttatcgaaggtgcaaatttcatcgcaactgggaagcttcttaccttgagcgagcaacag
ctcgtygattgtgatcacatgtgcgatccatyggaagaggatgcctgtgacagtggatgc
tccggcggacttatgacaaatgcctacaattatctaatcaaggcaggaggcatcgaatca
gaagagtcgtatccgtataccgggaagtctggtaaatgcaagtttgatgctgaaaagata
gccgtaaaagtctcgaacttcacgagtatcactggtgatgaggatcaaatggctgcccat
ttggtgaaacacggcccactcgccgttggattgaacgcggtgttcatgcaaacttacatc
gggggagtgtcgtgcccgttgatttgttcaaagagacgggtaaaccacggtgtgttgctt
gtgggatatggttcgaaagggttttcgatactaaggttgggtaacaagccttattggatc
atcaagaactcgtggggaaaacggtggggggagaatggatattatcggctttgcagaggg
cagggcatgtgtggtatggatacgatggtctcggaagttatcacggcaaagtcgtag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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