KEGG   Cynara cardunculus var. scolymus (artichoke): 112525834
Entry
112525834         CDS       T05604                                 
Name
(RefSeq) protein PELOTA 1 isoform X1
  KO
K06965  protein pelota
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112525834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112525834
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112525834
SSDB
Motif
Pfam: eRF1_1 eRF1_2 eRF1_3 HTH_MCM7
Other DBs
NCBI-GeneID: 112525834
NCBI-ProteinID: XP_024991884
Position
LG 13:complement(25731404..25747365)
AA seq 395 aa
MKIVRRDFAPDGPGSVKMIPDESDDLWVAYNLIAPGDTIMAVTVRKVLREAASGSREAER
VKLKLEIKVENVDYDKEGAVLRIRGKNILENEHVKIGAFHTLEIELHRPFVLRKVFWDSL
AIDALHQASDPSASADLAVVLMQEGLAHILLVGKSVTLTRSRIEASIPRKHGLSVAGYDK
ALNKFYENVLQAFMKHIDFKVVRCAVIASPGFTKDQFHRHLMLEAERRDLRHIIENKSRI
ILVHSTSGYKHSLREVLDAPNVMSIIKDTKAAQEVRALKDFFTMLSNDTHRACYGPKHVE
VAHERMAVQTLLITDELFRSSDVATRQRYVNLVNTVKESGGTTHVFSSMHVSGEREYRHF
IFWMFQSCTCIELAQLTGIAAILRFPLPDLDDIEM
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgaagatcgttcggagagatttcgccccggatggccctggcagcgtcaagatgattccc
gacgaatcagacgacttgtgggtcgcttataatttaattgctcccggtgatactatcatg
gctgttactgtaagaaaagttcttagagaagcagcttctggatcaagagaagcagagcgt
gtgaaactaaaacttgaaatcaaagttgagaatgttgattatgacaaagaaggtgctgtt
ctgagaatacgtgggaagaacatcctggaaaatgaacatgtaaaaataggggcatttcat
acacttgaaattgaattacatcggccttttgtgttgagaaaggtcttctgggactcacta
gcaatagatgcacttcatcaagcctcagatccttctgccagtgctgatcttgcagtggtg
ctaatgcaagaaggcttggcacatatcctccttgtaggtaaaagtgtgacacttacacgt
tctcggatagaagcttcgattcctcgcaagcatgggctttctgtagctggttatgacaaa
gctttgaataagttttatgagaatgttttacaagcatttatgaagcatattgacttcaaa
gttgttcgatgtgctgtaattgcaagtccaggattcactaaggatcaatttcatcgccat
ttaatgttggaagcagaaaggagagatctaaggcatataattgaaaacaagtcacgcatc
attcttgtgcactcgacttcgggatacaaacatagtttgagagaggtacttgatgctcca
aatgtgatgagtatcatcaaggatacaaaagcagcccaagaggtccgcgctcttaaggat
ttcttcaccatgctttctaatgacacacatcgtgcatgttatgggccaaagcatgttgag
gttgctcatgaaagaatggctgttcagacactacttatcaccgatgagcttttcaggagt
tctgatgtagctacaaggcaacgatatgtgaatttggtgaacacagtaaaggaatctggg
ggcacaactcatgtattttcttcaatgcatgtttcaggggagcgtgagtacagacacttc
atattttggatgtttcaatcttgtacttgtattgaactggctcagctcacaggaattgct
gcaatacttcgctttcccctaccggaccttgatgacatcgaaatgtaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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