KEGG   Cynara cardunculus var. scolymus (artichoke): 112529294
Entry
112529294         CDS       T05604                                 
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like isoform X1
  KO
K01887  arginyl-tRNA synthetase [EC:6.1.1.19]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    112529294
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccav01007]
    112529294
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112529294
   03029 Mitochondrial biogenesis [BR:ccav03029]
    112529294
Enzymes [BR:ccav01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.19  arginine---tRNA ligase
     112529294
Amino acid related enzymes [BR:ccav01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   112529294
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    112529294
 Prokaryotic type
   Other AARSs
    112529294
Mitochondrial biogenesis [BR:ccav03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    112529294
SSDB
Motif
Pfam: tRNA-synt_1d DALR_1 Arg_tRNA_synt_N tRNA-synt_1e
Other DBs
NCBI-GeneID: 112529294
NCBI-ProteinID: XP_024996275
Position
LG 16:16230970..16239556
AA seq 643 aa
MFLIEKPFLSPRLHLLRPPPHPHPSSSTFPSRNYILKETSRRSFPVKWAHSTSTMAAATE
DNWSLKDQIAKVFEVSLKVTVPDEPEVAPLIAACAKKEFGDYQCNNAMSLWSKIKGKGTE
FRGPQPVGQAIMKNLPTSEMIESTSIAGPGFVNVKLSRQWMAKSIQKMLKDGIETWAPKL
PVKRAIVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLI
EFLFEKFPDGEVSDQAIGDLETFYKASKQRFDGDPEFKDRAQKAVVSLQGGEEKYRKAWA
QICEISRKGYGKVYEHLGVHLEEKGESFYNPYIPGTLDLLREKGLIEESEGAQVIFIEGK
KIPLIVVKRDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQREHFEMFFTAAKRAGWL
PTDESKYPKTNHVGFGLVLGDDGKRFRTRSSEVVKLVDLLDEAKTRCKAALVERGKAAEW
TAEELEHTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIR
KSGKDVEELKKEGQLILEKEEERKLGLHLLQFAEIVEDACTNLLPNILCEYLYDLSEKFT
SFYSECQVVGSAEETSRLLLCEATALVMRQCFHLLGITPVYKI
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgtttttaatcgagaaaccttttctctctcctcgcctccatctcctccgcccccctcct
catcctcatccgtcgtcatctaccttcccatcccgtaattatattctgaaagaaacatct
agaagaagctttccagttaagtgggcacattccacatcaaccatggctgcagcaactgag
gataattggagccttaaagaccaaatagcaaaggtgtttgaggtctcacttaaagttact
gtccctgatgagccagaagtcgcgcctttaattgctgcctgtgctaaaaaagaatttggt
gattaccaatgcaacaatgccatgagcttatggtccaaaataaaaggcaagggtacagaa
tttagaggtccacaacctgttggacaggccatcatgaaaaatcttccaacatctgagatg
atagaatcaacatccatagctggtcctggctttgttaacgttaagttatcaaggcaatgg
atggcaaagagtatccaaaagatgctaaaagatggtatagagacatgggcaccaaaactt
cctgtcaaaagggcaatagtagatttttcatcacccaacatagcaaaagaaatgcatgtg
ggacatttacgatcgactatcattggagacacactagcacgtatgcttgagtattccaaa
gttgaagtgcttagaagaaatcatgttggggactggggtacgcagtttggaatgttgatc
gagttcttatttgaaaagttccctgatggggaggttagtgatcaagctattggagacctt
gagacgttctataaggcatcgaagcagagatttgatggtgaccctgagttcaaagataga
gcccagaaggcggtggtcagtctccagggcggcgaggaaaagtaccggaaggcatgggca
caaatctgtgagataagtcggaagggctacggaaaagtatatgagcatctgggagtccac
ttggaagaaaagggtgaaagcttttataatccctacattcctgggacacttgatctgctg
agggaaaagggattgattgaagaaagtgaaggagctcaggtgatctttattgaaggaaaa
aagataccccttatcgttgtgaagagagatggaggtttcaactatgcttcaacagatctt
gcagcgctgtggtatcgccttaatgaggaaaaagccgagtggataatatacgtcactgat
gtgggccagcgagaacactttgaaatgtttttcactgctgctaaacgtgcagggtggctt
ccgaccgatgagagcaaataccctaaaaccaatcatgttggatttggtcttgttctgggc
gacgatgggaagagattccgaacgcgtagtagtgaagtggtaaagttggttgatttgctt
gatgaagccaaaactcgttgtaaagcagcccttgtggagcgaggtaaggctgctgagtgg
actgctgaggagcttgagcatactgctgaagcagttggatatggtgctgttaagtatgct
gacctgaagaacaatagattgaccaattacacatttaattttgatcagatgcttaatgat
aagggaaatactgccgtctatctgctgtatgcacatgctcggatttgttcaattattcgg
aaatctggtaaagacgtagaggagctgaagaaggagggacaattaatattggaaaaagag
gaagaacgcaagctgggattacatttgctccaatttgccgagattgtcgaagatgcttgc
acaaatctattacccaatattttgtgcgaatacctatacgacctatctgagaagttcacc
agtttttactccgagtgccaggtggttggatctgctgaggagacaagcagattattgtta
tgtgaggcaactgcattggtaatgaggcaatgttttcatcttttggggatcactcctgtc
tacaaaatctga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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