KEGG   Cynara cardunculus var. scolymus (artichoke): 112529606
Entry
112529606         CDS       T05604                                 
Name
(RefSeq) protein FIZZY-RELATED 2-like
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112529606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112529606
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     112529606
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR19_1st WD40_Prp19 ANAPC4_WD40 EIF3I KNTC1_N Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 112529606
NCBI-ProteinID: XP_024996700
Position
LG 16:complement(3881245..3890660)
AA seq 311 aa
MDEPSIANMNQSSSIPPSKSQDPTTPSSNFTPSSLNYYHPSPSRTIYSDRFIPCRSASNF
ALFDISPPPPPPPADASRGEDNPSSSAAYTALLRTALFGSDLGFLVPPGTPDKKSFPVTN
SPASQNIFRFKSETRQSLHSLSPFGFDDQLPGVSHSPVKAPRKVPRSPYKVLDAPALQDD
FYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAQRGTSLAVGT
SNGKVQVMLKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTESEI
GASSFGRTHIR
NT seq 936 nt   +upstreamnt  +downstreamnt
atggatgaaccttcaatcgccaacatgaatcaatcttcatcgattccaccgtctaaatca
caagatcccacgaccccatcatctaatttcaccccttcttctctaaattattaccatcct
tctccttcacgcaccatctacagcgatcgcttcatcccttgccgatccgcttccaatttc
gccctctttgacatctctcctcctccaccgccaccgcccgctgatgcttcccgtggtgaa
gataatccttcatcgtccgccgcttacaccgcccttttacgaactgcattgtttgggtcg
gatctgggatttctggttcctcctggtacgcctgataagaagagttttccggttactaat
tctcctgctagccagaatatatttcggtttaagagtgagactaggcagtcgctgcattcg
ttgtctccgtttgggttcgatgatcagttgcctggcgttagtcatagtcctgttaaagca
ccgagaaaagttcccagatctccttacaaggttttggatgcaccagcattgcaagatgat
ttttatctgaatcttgttgattggtcttctcacaatgtattggctgtggggttgggcaat
tgtgtttatttatggaatgcttgtagtagtaaggtaacgaaattgtgtgatctgggaatc
gatgatagtgtgtgttcggttggttgggcacaacgagggaccagtcttgctgtcgggaca
agcaatggaaaagtccaggtaatgctcaaactcgcaacgcttactgggcacacgtataga
gtcctctaccttgcaatctcaccggatgggcagacaattgtgacgggagctggagatgaa
acacttagattctggaacgtgtttccttcgcccaaatctcagaacacagagagcgaaatc
ggagcatcttcctttggcagaacgcacatacgttaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (20)   

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