KEGG   Caretta caretta (Loggerhead turtle): 125633880
Entry
125633880         CDS       T09292                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay00900  Terpenoid backbone biosynthesis
ccay01100  Metabolic pathways
Module
ccay_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    125633880 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ccay01006]
    125633880 (GGPS1)
Enzymes [BR:ccay01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     125633880 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     125633880 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     125633880 (GGPS1)
Prenyltransferases [BR:ccay01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   125633880 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt PhiKZ_VTX
Other DBs
NCBI-GeneID: 125633880
NCBI-ProteinID: XP_048699781
Position
3:complement(73843690..73908064)
AA seq 355 aa
MVPPAGDLFPCRKSSFDREAKGSCKSSHAPLPSSAGTLFQAPRAASGESETLLLEMEGME
ETSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLIDD
IEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLQKVLTLDHPDAVKVFTRQLLELHQG
QGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSHYKRDLKPLLNTLGLFFQ
IRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENVDIKK
YCVHYLENVGSFEYTRQTLKKLESEAYKQIESLGGNPELVALVEHLSKMFKENEN
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggtgcccccggccggcgatttgtttccttgcagaaaaagttcctttgacagggaggcg
aaaggaagctgcaagagcagtcacgcaccactccctagcagtgcaggcacgttgtttcag
gcacccagagcagccagtggagagagtgaaacactgcttcttgaaatggagggaatggaa
gaaacatctgaaagaattcttttagagccatacaagtatttacttcaactgccaggtaag
caagtgagaaccaaactgtcacaggcctttaatcactggctgaatgttccagaagataaa
atacaggttattattgaagtgacagagatgttgcacaatgccagcttactcatagatgac
attgaagataactcaaagctacgacggggctttccagtggctcatagcatctatggaatt
ccgtctgtaataaattctgctaattatgtgtatttccttggcctacagaaggttttaaca
cttgatcacccagatgctgtgaaagtgttcactcgtcagctgctggaactccatcagggc
cagggtttggatatttactggagagatacatacacctgtcctacagaagcagagtataaa
gccatggtactacaaaagacaggtggtctctttggattagctgtgggcctcatgcagctc
ttttcccattataaaagagacttaaaaccactccttaatacacttgggctcttcttccaa
atacgagacgactatgctaatttacactccaaagaatatagtgagaacaagagtttttgt
gaagatttaactgagggaaagttctcattcccaactattcatgctatttggtccagacct
gaaagcactcaggtgcagaatattttgcgtcaaaggacagaaaatgtagacatcaaaaaa
tactgtgtacattaccttgagaatgtaggttcctttgagtacactcgacaaacgctgaaa
aagcttgaatctgaagcatataaacagattgagtcacttgggggaaaccctgaacttgta
gcactagttgaacacttaagcaaaatgttcaaagaaaatgaaaattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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