KEGG   Candidiatus Paracoxiella cheracis: ACJMKR_05265
Entry
ACJMKR_05265      CDS       T10945                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
cchr  Candidiatus Paracoxiella cheracis
Pathway
cchr01501  beta-Lactam resistance
cchr01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:cchr00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    ACJMKR_05265
   01503 Cationic antimicrobial peptide (CAMP) resistance
    ACJMKR_05265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cchr03036]
    ACJMKR_05265
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cchr02000]
    ACJMKR_05265
   01504 Antimicrobial resistance genes [BR:cchr01504]
    ACJMKR_05265
Chromosome and associated proteins [BR:cchr03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    ACJMKR_05265
Transporters [BR:cchr02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   ACJMKR_05265
Antimicrobial resistance genes [BR:cchr01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    ACJMKR_05265
SSDB
Motif
Pfam: Beta-barrel_RND_2 BSH_RND Beta-barrel_RND BSH_CzcB YknX_C Beta-barrel_YknX HH_MFP_RND RND-MFP_C CSD2 BSH_CusB Beta-barrel_RND_rel DUF3290 CzcB_C Beta-barrel_AprE
Other DBs
NCBI-ProteinID: XQW91939
Position
complement(1014554..1015672)
AA seq 372 aa
MIIMLIGVGILFGIVFFIKYKEKQADKKYREAHRVPIFVVSAMKVPYVSWAQLLKGSGSL
RTVKGVNVTTQLAGMVRNIYFSAGSYVHKGQLLVLLNIDPDVAKLHSLEAEAEYAKITYF
RNKRQYAIGAVSKEQLDSDEANYKNTAAQVAEQKAIIEEKTIRAPFSGRLGISLVNPGQY
LVPGDAISNLQTIDPIYADFNFPQENIPNIKVGQSVSVNLNNFPDKTFTGNITTINPAVD
ENTRNVIVEVTLSNPEHILSPGMFVSGAITIGAPKKYLTLPIAAIAYNPYGDYVYVLTKT
KQTEKGYPVWKATQKVVTTGEVRGNQTAILTGIKEGEMIVTSGQLKLQNNSLVVINNKVQ
PSDNPNPDITNE
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgatcatcatgctcattggagtgggcatactatttggcattgtattttttattaaatat
aaagaaaaacaagccgataaaaaatatcgcgaagcacacagggtgccgatttttgtagtc
tctgcaatgaaagtaccctatgtgtcgtgggcacagttattaaaaggtagcggcagtctg
cgaacggtgaagggtgttaatgtaacaacccagcttgcgggcatggttcgtaatatttat
ttctctgcaggatcctatgtacacaaaggtcaattgcttgttttattaaatatcgacccc
gatgtcgccaaactacactcacttgaggcagaagcagaatatgcaaaaattacctatttt
cgcaataaacgccaatatgctatcggcgctgtcagtaaagagcagcttgattccgatgag
gcaaattataaaaataccgctgctcaggttgctgaacaaaaagctattattgaggaaaaa
actattcgcgcacccttctcgggacgcttgggtatttctctagttaatcctgggcaatat
ctagttccaggtgatgctatttcaaatttacaaacgatcgatcccatttacgctgatttt
aattttcctcaagaaaatattccaaacattaaagtcggacaaagtgtcagcgtcaatctc
aataattttcctgataaaacgtttacaggcaatatcaccaccattaatcctgcggtcgat
gaaaatacaagaaatgtaattgttgaagtaacactctctaaccctgaacacattttatcg
cctggcatgtttgtatctggcgctattacaataggggctccgaaaaaatatctaacgctc
cctatcgcagcaatagcttacaacccttatggtgactatgtttatgtgttaacaaaaaca
aagcaaacagaaaaaggttatcccgtttggaaagcaacacaaaaagtcgtcactacagga
gaagtacgcggcaatcaaaccgcaattctaacaggcattaaagaaggtgagatgatcgta
acgagcggccaattaaaattacaaaataacagtttggtggtaatcaacaacaaagtgcaa
ccatccgacaatcctaacccggatattaccaatgaatag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (14)   
   Pfam (14)   
All databases (15)   

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