KEGG   Cinclus cinclus (white-throated dipper): 134047161
Entry
134047161         CDS       T10813                                 
Symbol
CWC22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
ccic  Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccic03041]
    134047161 (CWC22)
Spliceosome [BR:ccic03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    134047161 (CWC22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    134047161 (CWC22)
SSDB
Motif
Pfam: MA3 MIF4G CENP-B_dimeris HEAT_5MP1_2
Other DBs
NCBI-GeneID: 134047161
NCBI-ProteinID: XP_062354103
Position
9:5938744..5975394
AA seq 756 aa
MKSRVTQVNHGSSHERKENYSSRRESLSPEDRDMECDRSRSPTPRKRRYSDDSRYDEEYS
RRDYYDDRTSDGRRMERGRDRHYERWEDREYDRRKQRRYSSPDRRSPERSTGQSSLAHDE
TTSKKKKEEVDPILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLVNK
VNVSNIENIIHELLQENIVRGRGLLSRSILQAQSASPIFTHVYAALVAIINSKFPNIGEL
ILKRLILNFRKGYRRNDKQLCLTSSKFVAHLMNQNVAHEVLCLEMLTLLLERPTDDSIEV
AIGFIKESGLKLTEVSPRGINGKYSQPKPILAFVLVNTSYICISLFSKAIFDRLRHILHE
SKIDMRVQYMIEVMFAVRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDDYNPEDVLNVF
KMDPNFMENEEKYKMLKKEILDEGDTESEGNEEAGSSEEDEEDDEEEDEDGQKVTVHDKT
EINLVSFRRTIYLAIQSSLDFEECAHKLLKMDFPESQTKELCNMILDCCAQQRTYEKFFG
LLAGRFCMLKKEYMESFEAIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECI
ILSEETTTSSSRIFVKIFFQELSEYMGLPNLNARLKDETLQPFFEGLLPRDNPRNTRFAI
NFFTSIGLGGLTDELREHLKNAPKLIMTQKQNVESSDSSSSSDTDSSSDSDSDSSSSSSE
SSSSSDSSSSSDSSSDSVAQACSRRCPVTVPVDSFM
NT seq 2271 nt   +upstreamnt  +downstreamnt
atgaagagcagggtgacacaagtaaatcatggctccagtcatgaaaggaaggaaaactac
agttcccgacgtgaaagtctgtctccagaggacagggacatggagtgtgataggtcccgg
tctccaactcccaggaagaggagatactctgatgacagcagatacgatgaggaatattca
agacgggattattatgatgacagaacctcagatggaagaaggatggaaagggggagagat
agacactatgagaggtgggaggacagagaatacgatcgaaggaagcagagaagatactcc
tcacctgaccgtaggagtccagagaggtcgacaggccagagctcacttgctcacgatgag
accacctcaaagaagaagaaagaagaagtggatccaatcctcactcgcacaggtggtgca
tatattccacctgccaagctcaggatgatgcaagagcaaatcactgataaaaatagcttg
gcgtaccagaggatgagttgggaagccttaaagaagtcgatcaatggtcttgtcaataaa
gtgaacgtttctaatatagaaaacatcattcatgagctcctgcaggagaatattgttcgg
ggaaggggattgctgtctagatccattttgcaagctcagagcgcctctccaatttttact
catgtttatgcagctcttgtggcaattatcaattcaaagtttccaaatatcggtgaattg
atcctcaagaggctgatactgaattttcgtaaagggtatcgcagaaatgacaagcaactc
tgtctaacatcttcaaaatttgttgcacatttgatgaatcaaaatgtggctcatgaggtt
ttatgtttggaaatgctcactttgcttcttgaaaggcctactgatgacagtattgaagta
gcaattggatttattaaagagagtgggctcaaattaacagaagtttctcctagaggtatt
aatggtaagtacagccagccaaaacctatcttggcatttgtattagtaaatacctcttat
atttgcatttctctcttttccaaagcaatctttgatcgccttcgacacatcctgcatgaa
tctaaaatcgatatgcgtgttcagtacatgatagaagtcatgtttgctgtgaggaaggat
ggcttcaaggatcatccaatcattccagagggattagatctagtggaagaggaggatcag
tttactcatatgttgccattggaagatgactacaacccagaggatgttcttaatgttttc
aagatggatccaaacttcatggaaaatgaggagaaatacaaaatgctgaagaaagaaatc
cttgatgaaggtgacactgaatctgaaggaaatgaagaagctggaagtagtgaagaagat
gaagaagacgatgaggaggaggatgaagatggtcagaaagttactgtccatgataaaaca
gaaattaacctggtctcgttccgtcgtacaatttatctggctattcagtcaagcttagat
tttgaagaatgtgctcacaaactgctgaagatggacttccctgaaagtcagactaaagaa
ctctgcaatatgatacttgactgttgtgctcagcaaagaacatacgagaaattctttggg
ttactggcagggcgtttctgcatgttaaagaaagaatatatggaatcctttgaagccatt
ttcaaggaacagtacgataccattcatcgtttggaaacaaacaaactgaggaatgtggcc
aagatgttcgctcatctcctgtacaccgattcaattccctggagtgttcttgaatgtata
atactgagtgaagaaactactacatcctccagtagaatttttgtcaaaatattctttcag
gaactcagtgaatatatggggcttcctaatttaaatgcaagattaaaagatgagacactg
cagcctttctttgagggattgctacctcgggataacccaagaaacactcgctttgccatc
aatttcttcacttctattggccttggaggattaacggatgaattacgggaacatcttaaa
aatgcaccaaagttgattatgacacagaagcaaaatgtcgagtcatcagattcgtcttca
tcttcagacacagactcttcctcagattctgattctgacagcagcagtagtagctcagag
tcatccagcagcagtgactcctcatctagcagtgacagcagcagtgactcagtggcacaa
gcctgctctagaaggtgtccagttactgtgcctgtagactcattcatgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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