KEGG   Coregonus clupeaformis (lake whitefish): 121543062
Entry
121543062         CDS       T08357                                 
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145  Phagocytosis
cclu04517  IgSF CAM signaling
cclu04540  Gap junction
cclu04814  Motor proteins
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121543062 (tubb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    121543062 (tubb5)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    121543062 (tubb5)
  09142 Cell motility
   04814 Motor proteins
    121543062 (tubb5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121543062 (tubb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121543062 (tubb5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121543062 (tubb5)
   04147 Exosome [BR:cclu04147]
    121543062 (tubb5)
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121543062 (tubb5)
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121543062 (tubb5)
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121543062 (tubb5)
  Exosomal proteins of colorectal cancer cells
   121543062 (tubb5)
  Exosomal proteins of bladder cancer cells
   121543062 (tubb5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 121543062
NCBI-ProteinID: XP_045075339
Position
Unknown
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDGDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEAEDDDA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcatatccaagccggccagtgtggtaaccagattggtgccaagttc
tgggaggtgatcagcgatgagcacgggattgaccccacaggcacctaccatggagacggc
gacctgcagttggacagaatcagtgtctactacaacgaggcaacaggtggtaaatatgta
cccagggccatcctcgtggaccttgagcctggcaccatggactctgtgaggtccggaccc
tttggacagatcttcaggccagacaactttgtgttcggccagagcggtgctggtaacaac
tgggcaaagggccactacacagagggagcagagctggtggactctgtcctcgacgtagtg
aggaaggagtccgaaaactgtgactgcctgcagggcttccagctcacccactccctgggt
gggggcacggggtcgggcatgggcaccctgctcatcagcaagatcagagaggagtaccct
gaccgcatcatgaacactttcagcgtggtgccctcaccgaaggtatcagacacagtggtg
gagccctacaacgccacactctccgtccaccagctagtggaaaacacagacgagacgttc
tgcatcgacaacgaggccctctatgacatctgcttccgcacgctcaaactgaccacgccc
acctacggtgacctcaaccaccttgtgtcagccaccatgagcggcgtcaccacctgcctg
cgcttccctggccagctcaacgctgacctccgcaaactggccgtcaacatggtgcccttc
ccccgtctgcacttcttcatgcccggcttcgcccccctcaccagcaggggaagccagcag
taccgcgcgctcaccgtgcccgagcttacccagcaggtgttcgacgcaaaaaacatgatg
gccgcctgcgaccctcgccacggccgctaccttactgtggccgcagtgttccggggccaa
atgtccatgaaggaggtggacgagcagatgctcaatatccagaacaagaacagcagctac
tttgtggaatggatccccaacaacgtgaagaccgctgtctgcgacatcccgccccgtggt
cttaaaatgtctgtcaccttcatcggcaacagcacagccatccaggagctgttcaagcgt
atctctgagcagttcactgccatgttccgccgcaaggccttcttgcactggtacaccgga
gagggcatggacgagatggagttcactgaggcagagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggacgccaccgctgaggaggagggagagttcgaggaggctgaa
gacgatgacgcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system