KEGG   Coregonus clupeaformis (lake whitefish): 121580587
Entry
121580587         CDS       T08357                                 
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu00900  Terpenoid backbone biosynthesis
cclu01100  Metabolic pathways
Module
cclu_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    121580587 (ggps1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:cclu01006]
    121580587 (ggps1)
Enzymes [BR:cclu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     121580587 (ggps1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     121580587 (ggps1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     121580587 (ggps1)
Prenyltransferases [BR:cclu01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   121580587 (ggps1)
SSDB
Motif
Pfam: polyprenyl_synt GCSF
Other DBs
NCBI-GeneID: 121580587
NCBI-ProteinID: XP_041751486
Position
Unknown
AA seq 311 aa
MDGDMDSAGAGPERILLEPYKYLLQLPGKQVRKKLSQAFNHWLNVPEDKLQVIIEVTEML
HNASLLIDDIEDSSTLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVRVFT
RQLLELHRGQGLDIHWRDTYTCPTESQYRTMVLQKTGGLFGLAVGLMQLFSGWKRDLKPL
LDTLGLFFQIRDDYANLNSAEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQ
RTENVDIKKYCVDYLEKVGSFAYTRETLRGLEAEAYRLITDLGGNPELEGLVKHLSKMFR
EPEAKARPKED
NT seq 936 nt   +upstreamnt  +downstreamnt
atggatggagacatggattcagccggggcagggccggagagaattctactggaaccttac
aagtacctgctgcagctgccaggaaaacaagtccggaaaaaactctctcaggcgtttaac
cactggctcaacgttcccgaggataaacttcaggtgatcatagaggtgactgagatgctg
cacaacgccagtctcctgatagatgacatcgaggacagttctacactgaggagaggtttc
cctgtagcccacagcatctatggagtcccctctgttatcaactctgccaactacgtctac
ttcctgggactggagaaggtgctgaccctggatcaccccgaggcagtacgtgtgttcacc
agacagctgttggagctgcaccgtggccagggccttgatatccactggagagacacctac
acgtgccccacagagagccagtaccgcaccatggtcctccagaagacagggggcctgttc
ggcctggccgtagggctcatgcagctgttctctggttggaaacgagaccttaagcccctc
ctggacacgttagggctcttcttccagatcagagacgactacgccaacctgaactcagcg
gagtacagcgagaacaagtccttctgtgaggacctgacggaggggaagttctccttcccc
accatccacgccatctggtcccgtcctgagagcactcaggtccagaacatcctgagacag
aggacggagaacgtggacattaagaagtactgtgtggactacctggagaaggtgggctcc
ttcgcctacaccagagagaccctgagagggctggaggccgaggcataccgccttatcacg
gatctggggggaaaccctgaactggaggggttggtgaaacacctcagtaagatgtttaga
gagcctgaggctaaggctaggcctaaagaggactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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