KEGG   Coregonus clupeaformis (lake whitefish): 121584840
Entry
121584840         CDS       T08357                                 
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121584840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121584840
Membrane trafficking [BR:cclu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    121584840
SSDB
Motif
Pfam: C2 RBD-FIP
Other DBs
NCBI-GeneID: 121584840
NCBI-ProteinID: XP_041756926
Position
16:34749679..34764758
AA seq 1339 aa
MSLADQSQQWYPTSVQVTVFQARNLRIKGKNGTNDAYAIMQVAKDKFSTSVVEKCVAPVW
KEEATFDLALFHHGNAERCTLYIIVMHRALVGLDKLLGQAVINLLDLHDNSVSKKTDWYK
LLDKNGKEDKVRGEVMLDIQFMRNNLTASMFDLSMQDKPRSRIGKLKDKVRGKKKDSFSD
SASAIVPSFSQVLTDSEGEADSHSVCSESPGAKKKSKLKSLFAPKSNLQRNVSQSMSTLG
TLPEKNVSLSGSRSSGLNVDSPDVKKKFKFLGHKRTGSNDSKVSTGPFSLLGRSKQKEDP
NSTCINGNHVYAEEVEPMSGSTLSLNSSGQGSVEDVRSRKQPSDASVDSLKGASVNTYRK
ESADRDRALLEQRRLQEDEKREAEEKRQNEEKHRVQLKILQEEEERKQQEEQERRRRFQE
DEARRKKQREEDEERKRLAEERRRLKAEELQRLGEEQRQQEEAKMAEEQKQQDEASVTER
LSSLFGMIRKKEEKKKEELQQSVAKEERPNPAPRHSTRDVDVPAPRHAANPFEDILLSPD
PPIPFEESPVDHQKGVRGTNTQSAAVFLNSNRTAKVSAVKPRLVESLKQPETPDSDSNRQ
QSPSLSCAESPLSSIPSESPDMFSNLHSSLAPPKTRRSTSESPYSSTENLAAIGSSPSGS
DRKRQAPMPPSPMEPQSHGKPNAGSRSVSAKSAVASGYLVTIKEVEAKRPPLPLPDYDRL
FPQKRHGVQGQTQWDHIIAEVNQRQQEYTSQLIGEEMSVDGPGLNSPAPPRNDKYSYLQE
RAAERLNQQQTEVQEVQSSSWRRVGPNSSPALIPPPKPVATAPLRLVTDSNTKQGQSTAQ
ANPSVERRNVLVSTDPMAQSKDVPSVKPQEDARKVLNTSIALASDGHSVLPIEKPSRRTS
KEVLVSSSTDEPKGLPNTLKEIPTAKPRQRLIPKEPVRRADLEPKAAESTTVQQENRSEM
RAASTPDIMEMRVSSPVMAKNTEVPANREKQPSSDYVESDINKKQLERIMKEKFAEPDPF
PIAEILPKDPWAQPEQSHSGDYLFFGGPQKDEKLEEQRMTTDDLDKHLAPNNSTDQSSSC
NDSDSEKHPEEEKPEGPSPAFQRGFSQKKKKQAAPQPPANSGNKGAMGKGELDKQDPSAT
TRSVKLEPQDKNTRQRNLYGREKVETQAREEKWTAEHFTSSLMSSVLTSPEPPQSVVGEP
NPQAGAEGKTLLQAWVSPSEVHSLTVLSSNGDGPALTPRRPHPVKPMSSMESHAPISTAV
VSEMKTYDSSLAPGKVESGPYTQLTQEELITLVVKQQMELSNKDSKIVELEEYIDNLLVR
VIEEKPSILQGLNSPKQAL
NT seq 4020 nt   +upstreamnt  +downstreamnt
atgtctttggctgaccaaagtcagcagtggtatcccacaagcgtacaggtaacggtgttc
caagccaggaatttgaggatcaaaggaaagaatggaaccaacgatgcctatgccatcatg
caggtggccaaagacaagttttctacctcggttgtcgaaaaatgtgtcgcaccggtatgg
aaggaagaggcaacgtttgacctggcactgttccaccatggcaatgctgaacgctgcaca
ctgtatatcatagtaatgcaccgagctctggtgggactggacaagctcctgggacaagct
gtgatcaacctactggatctacacgataacagcgtcagcaaaaagaccgattggtacaaa
ctgctggataagaatgggaaggaggacaaggtcagaggggaagtgatgttggacatccag
ttcatgagaaacaacttgacagccagcatgtttgacctttccatgcaagacaaaccacgc
tcccgcatcggaaagctcaaggacaaagtgcgtgggaagaaaaaggacagcttctctgac
tcggcctctgcaatagtgccctctttcagccaggtactcactgacagcgagggagaggct
gactcccactcagtgtgctcagagtcccctggggcgaagaagaaatccaagctcaagtcc
ctctttgcccctaaatccaacctgcaacgcaacgtctcccagtccatgtccacactgggc
actcttcctgagaaaaacgtgtccctcagtggaagtcgctcctctggcctcaatgtggat
tctcctgatgttaaaaagaagttcaagttcctgggccacaagcggacaggcagcaatgac
agcaaagtgtctacaggacctttttctcttctgggcagatccaagcagaaagaagacccg
aacagcacgtgcatcaacggcaaccatgtgtatgcagaggaggtagaacccatgtctgga
tccaccctcagcctcaacagctctggtcagggttcagtggaggatgtacgcagccgcaag
caaccatctgacgcctccgtagactccctcaagggcgcctctgtcaacacctacagaaag
gagtctgcagatagggatagggctctgctggagcaaaggcgccttcaggaggacgagaag
agggaggcagaggagaaaagacagaatgaggagaaacacagagtgcagctcaagatactg
caggaggaggaggaacgcaagcaacaggaggagcaggagaggaggcgaaggttccaggag
gatgaggcaaggaggaagaagcagcgggaagaggacgaggagcggaagcggctagcggaa
gaaagaaggcggctgaaggcagaggagctgcagaggctgggggaggagcagaggcagcag
gaggaggccaagatggcagaggagcagaaacaacaggatgaggcctctgtgactgagagg
ctgtcctctctgtttggtatgatcaggaagaaggaggagaagaagaaggaagagctgcag
cagagtgtcgccaaggaggagaggcccaacccagctcccagacacagcaccagagatgtg
gatgtccctgcccctcgccatgctgccaacccattcgaagatatcctcctcagtccagac
cctccaatcccgtttgaggagagcccggtggaccaccagaagggtgttcgcggcaccaac
acccagagtgctgcagtcttcctcaactccaaccgcactgccaaggtgtctgcagtcaag
cctagattggtggagtctctgaagcagcctgaaacccctgactcagactccaataggcag
caatctccctctctgtcctgcgccgaatcccctctctctagcatcccctctgagtctcct
gatatgttctccaatcttcactcctccctggctccccctaagacacggaggagcacctct
gagtccccctacagcagcactgagaacttggctgccataggatcttcccccagcggatct
gacaggaagcggcaagctcctatgccccccagcccaatggaaccgcaaagccatggaaaa
cccaatgcaggctccagaagtgtgtctgctaaatctgctgttgcaagtggctatcttgtg
acaattaaagaggttgaggccaaaagacctcctctacctcttcctgactatgatcgcctg
ttcccacagaagaggcatggagtacaaggacagactcaatgggaccatatcattgcagag
gtgaatcagagacagcaggaatacacatctcagctcattggtgaagaaatgagtgtggat
ggcccaggcctcaactccccagcacctccacgcaatgacaaatattcctacttgcaggag
agggcagcagaacgcctaaaccagcaacagacagaagttcaggaagttcaatcttcgtct
tggaggagagtggggccaaacagttcgccagcactcatcccccctcccaaaccagtagcc
acagccccccttagactagtgacggactcaaacacaaagcaaggccagagcactgcacag
gctaatccatctgttgaaagacgcaacgtcttggtctctacagatcctatggctcagagc
aaagacgtaccctcagtgaaacctcaggaggacgcaaggaaggtgcttaacacatccatt
gctttagccagtgatggccattctgttctcccaatagaaaagcctagtagacgtacatca
aaggaagttttggtgtcaagttctacagatgaacctaaaggactgccaaacactctcaaa
gagatccccacagccaaacccagacaaaggttaatccccaaagagccagtgagacgagca
gatcttgagccaaaagcagcagagtctaccactgtacagcaggagaacagatcagaaatg
agggcagcctccacaccggacatcatggaaatgagagtgagtagtccagtgatggcaaag
aacactgaggtacctgctaaccgtgaaaagcaaccctcatctgactatgtagaaagcgac
attaacaaaaaacaactggaacgcattatgaaagagaagtttgctgaacctgaccctttt
cccattgcggagatcctgcctaaagacccatgggcccaaccagagcagagccacagtgga
gattacctgttctttggaggaccacagaaagacgaaaagcttgaagaacagagaatgaca
actgacgacttggataaacatttagcgccaaataattcaacagatcagtcctccagttgt
aacgacagtgattcagaaaaacatccagaggaggaaaaaccagaagggcctagtcctgct
tttcaaaggggattttcacaaaagaaaaagaaacaagcagcacctcagcctccagctaat
tcgggcaataaaggagccatgggaaagggtgagctggataaacaagacccttcagccact
acaagatctgtcaaacttgagcctcaagacaaaaatactagacagagaaatctctatggt
agagaaaaggtggaaacccaagccagggaagagaagtggacagcagaacattttacctcc
tccctcatgtcttctgtcctgacatctcctgagcctccccagtcagtagtgggcgagccc
aacccccaggcaggggctgaaggaaagaccctgctacaggcctgggtctcaccctctgag
gtgcattcactcactgtgctgagtagcaatggagatgggccagccttaacaccacgcagg
cctcacccggtgaagcccatgagctccatggagagccatgctcccatcagcaccgcggtg
gtgagcgagatgaagacctatgacagctcactggcaccaggcaaggtggagagtgggccc
tacacccagctgacccaggaggagctgattaccctggtggtgaagcagcagatggagctc
tctaataaggactctaagatcgttgagctggaggagtacatagacaacctgctggtgcgt
gtcatcgaggagaagcccagcatcttgcaaggcctcaactctcccaagcaggccctgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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