KEGG   Caprimulgus europaeus (Eurasian nightjar): 306722551
Entry
306722551         CDS       T11931                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ceur  Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ceur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    306722551 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ceur03400]
    306722551 (TDP1)
DNA repair and recombination proteins [BR:ceur03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     306722551 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 306722551
NCBI-ProteinID: XP_079053832
Position
9:complement(<19089382..>19140703)
AA seq 607 aa
MLQEGAHGKWTVSSSDESTEENSDSEKPSTSSLLDAAHGRTSGPQYPCSEARKAAHKRKA
SPLKLSDKRISTEIPPAEKQRTSQEGLGWCVSSSDEEPEVEEKHGHKETLKEEKSDAPEE
HPLNLCKDNELSENQKAEEYDETPSEAQDTWDLLNRGNPFRFFLTKVTGIEQRYNSGALH
IKDILSPLFGTLISSAQFNYCIDVAWLVRQYPQEFRKKPLLIVHGEKRESKAELLAQARP
YENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIAEDWHQKTQGIWLSPLYPR
LPQGTAGSAGESETHFKSDLISYLMAYNSPTLQEWIDLIQEHDLSETRVYLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEHASSIPTQESWPVVGQFSSIGSMGADGSKWLCSEFQESLVAA
GSNVTTLLKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFNKWSAE
ISGRSHAIPHIKTYMRPSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLF
LPSAFGLGKGYFHVRGKMLSENNDSATYFPVPFDLPPEQYGSKDQPWIWNIPYTNAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggtgcacatggaaaatggacagtatctagcagtgatgaaagtacagag
gaaaattctgacagtgaaaaaccatctacatcatcactattggatgctgcacatggcaga
acaagtgggccacaatatccatgctctgaagctaggaaagcagctcacaagagaaaagct
tctccactgaagctcagtgataaaagaatttctacagaaatacctccagcagaaaaacag
agaactagccaagaaggcctaggctggtgtgtttctagcagtgatgaagagcctgaagtt
gaggaaaagcatggtcacaaagaaacactgaaagaagaaaagagtgatgcacccgaagaa
catcctctgaacctttgcaaagataatgaactctcggagaatcagaaagcagaggagtat
gatgaaacacccagtgaagcccaagatacctgggatttgttgaatagaggaaaccctttc
aggttttttctcactaaagtcacaggaattgaacagaggtataattctggagccctgcac
ataaaagatatcttatctcctctttttgggactctcatctcttctgctcagtttaactac
tgtatagatgtggcgtggcttgtaagacagtatccacaagaattcaggaagaagccattg
ttgatagttcatggagaaaagagagagtccaaagctgaactgcttgcacaagcacggcct
tatgagaacatcagcttttgtcaggctaagctggatattgcgtttggaactcaccatacg
aaaatgatgttgttgttatatgaagaaggtcttcgagttgtgatacatacatccaatctt
attgctgaagattggcaccagaaaactcaaggaatatggctgagccctttatatccaagg
ctacctcagggaacagctggttctgctggtgaatctgaaactcattttaaatctgaccta
ataagttacttgatggcttacaattctcctacactccaggaatggatagatctgattcaa
gaacatgatttatcagagacaagagtatacctgcttggttctacgcctggacgatatcaa
ggcagtgataaagaaaagtggggtcatcttaggctcagaaagcttttgaaggagcatgct
tcctcaataccaacacaggaatcctggcctgttgttggacagttctcaagcattggttca
atgggagctgatgggtccaagtggctgtgctcagagttccaggagagtctggtggctgca
ggcagcaatgtgacaactctccttaaatgtgatgttccaattcacttggtttatcctact
gtgaacaatgtgaggcaaagtctggaaggctatcctgctggtggctcgcttccatacagt
atacagacagcacagaaacagctgtggctgcattcctattttaacaaatggtcagcagaa
atctcgggtcgaagtcatgctatacctcacattaagacatacatgagaccctctcccgac
ttccagaagattgcatggttcttagtgacaagtgccaatctatctaaagcagcttgggga
gctctggagaaaaacggtacacaactaatgatccgttcttacgaacttggagtccttttc
ttgccttcagcatttggattgggcaaaggttacttccatgtaagagggaaaatgctttca
gaaaataatgattcggcaacatattttcctgtaccttttgacctgccaccagagcagtat
ggaagcaaagatcaaccgtggatttggaatattccttacactaatgcccctgatacacac
ggaaatatgtgggttccatcgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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