KEGG   Cellulosilyticum sp. WCF-2: EKH84_11865
Entry
EKH84_11865       CDS       T06333                                 
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
cew  Cellulosilyticum sp. WCF-2
Brite
KEGG Orthology (KO) [BR:cew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cew03009]
    EKH84_11865 (rlmD)
Enzymes [BR:cew01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     EKH84_11865 (rlmD)
Ribosome biogenesis [BR:cew03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EKH84_11865 (rlmD)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 TRM5-TYW2_MTfase Methyltransf_25 Cons_hypoth95 PrmA MTS Methyltransf_15 Methyltransf_11 Methyltransf_12 N6_N4_Mtase TPMT UPF0020 Methyltransf_4
Other DBs
NCBI-ProteinID: QEH69047
UniProt: A0A5B9YD63
Position
2668080..2669450
AA seq 456 aa
MDKPIEKNQHYELTITDMGSEGEGIGKINDFTVFIPRAITGDVVEIRIVKVKKSFGYGKL
VKLITPSPFRVEPICEVADTCGGCQLQHLSYEAQLDWKTKKVKDCLNRIGGLKDIEVLPT
LGMDTPYHYRNKAQYPIRQINGKVQTGFFAPRSHQLIPLETCYIQDPKKEAIMKAVIAFL
EKYKISIYDEEKHTGLVRHLMIKTGYHTEEMMVCLVINGPKLPHADEFVKAIKAVAPVTS
IILNQHLEKSNTILGNSCTVLDGENAIIDYIGDLQFKISPLSFFQVNPQQTEVLYTKALE
YAELTGDEIVWDAYCGIGSISLFLAQKAKKVYGVEIIPEAIENAKENAALNHITNAEFYV
GKAEEVIPQMYEQGIVADTIVVDPPRKGCDSKLLETLIKMSPNKIVYVSCDPATLARDLA
YLVVEGYQVEKVQPVDMFPQTTHVESVVKMSRIVSP
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggataaaccaattgaaaagaatcagcactacgagctaactattacagatatgggctca
gaaggagaagggattggtaaaatcaatgactttaccgttttcattcctagagcgattact
ggagatgtagtagaaatacgtattgtaaaagtgaaaaaaagctttggctatggcaaatta
gtaaagcttattacaccttcaccttttagggtagaacctatttgtgaagtggcagatacc
tgtggaggctgtcagcttcaacatctgagctatgaggcacaattagattggaaaaccaaa
aaagtaaaagattgcttaaatcgtattggtggtctaaaagacatagaggtattaccaacc
ctaggaatggacaccccttatcattatcgtaataaagcccaatatcctattcgtcagatt
aatggcaaagtacaaacgggcttttttgctcctcgtagtcatcagctaataccactagaa
acttgttacattcaagatcctaaaaaagaagccattatgaaagctgtaatagctttttta
gaaaagtacaagattagcatttatgatgaagaaaagcatacaggactggtacgccattta
atgattaaaacaggttatcatacagaggagatgatggtgtgcttagtgattaacggaccc
aaactacctcatgcagatgagtttgtaaaagctattaaagcagtagcgcctgtaacaagt
attatacttaaccagcatttagaaaaaagtaacactatattaggcaatagctgtacagtt
ttagatggagagaatgccattattgattacattggagatttacagtttaaaatctcacct
ttatccttcttccaagtcaaccctcagcaaacagaggtactatataccaaagctttagaa
tatgcagagctaacaggcgatgagatcgtttgggatgcctactgtgggataggctctatc
tctttatttcttgcacaaaaagcaaagaaagtatatggcgtagaaattataccagaagct
attgaaaatgcaaaagaaaatgcagctctcaatcatattaccaatgcagaattctatgtg
ggaaaagcagaggaagttatcccacaaatgtatgaacaaggcattgtggcagatactata
gtcgtagatccaccacgcaaaggctgcgatagcaaattattagagactttaatcaagatg
tcacctaataaaatagtatatgtttcttgtgatccagctactttagcaagagatttagcg
tatcttgtagtagaagggtatcaagtagagaaggtacaaccagttgatatgtttccgcaa
acgacgcatgtcgagagtgtggttaagatgtcaaggatagtgtccccctaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (17)   

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