KEGG   Cricetulus griseus (Chinese hamster): 113830752
Entry
113830752         CDS       T02813                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113830752
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cge01002]
    113830752
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cge03021]
    113830752
   03036 Chromosome and associated proteins [BR:cge03036]
    113830752
Peptidases and inhibitors [BR:cge01002]
 Metallo peptidases
  Family M1
   113830752
Transcription machinery [BR:cge03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     113830752
   Coactivators
    SAGA/TFTC/STAGA complex
     113830752
Chromosome and associated proteins [BR:cge03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     113830752
SSDB
Motif
Pfam: Peptidase_M1_N Peptidase_M1 SR-25 AP3D1
Other DBs
NCBI-GeneID: 113830752
NCBI-ProteinID: XP_027287497
UniProt: A0A9J7JYI6
Position
10:32448794..32523583
AA seq 1202 aa
MPPTGVESSRMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDGKTPELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAH
VFSCGYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHY
VLTIPTAAPNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILT
CRYPYSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFG
CFISRMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHP
IFGGGKEKDNPSSHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKL
LSLASTASSQKFQSHMWSQMLVSTYGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFA
FNRKRNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKS
RRNKKKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYE
RDVVAQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGP
PAMKSLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFIL
DLIKYNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRF
LNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDSSLFKSYAEYGHFVDIRIAALEAVVD
YTKVDRSCEELQWLLNMIQTDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKL
MNSGTAHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAGAG
NQESSSNPGSHAQLAGFQNPFSSSQDEEEVDMDTVHDSQAFISHHLNMLERPSTPGLSKY
RPSSSRSSLMPQHSLGCDIIPTTKPQWTMELSRKGIGKEQPLEMSVHCMGAAPLSMFGKE
STSSRHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKDKDKEPFAFSSPASGRSVRSPSL
SD
NT seq 3609 nt   +upstreamnt  +downstreamnt
atgccgcccaccggcgtcgagtcctccaggatgaacaggaagaagggagacaagggcttc
gagagcccgcggccgtacaaattaacccatcaggtcgtctgcatcaacaacataaacttc
cagaggaaatctgttgtgggatttgtggagctgactatatttcctacagttgccaacctg
aatagaatcaagttgaacagtaaacagtgtagaatttaccgagtcaggatcaatgacttg
gaggctgcttttatttataatgatccaaccttagaagtttgtcacagtgagtcaaaacag
agaaatctcaattatttttccaatgcctatgcagctgcggttagtgctgtggaccctgat
gcggggaatggagaactctgcattaaggttccatcagagctctggaagcatgtcgatggt
aaaacaccagagttaaaggttctgaagatacatattaatttttctttggatcagccgaaa
ggaggtcttcattttgtggtacccagtgtagagggaagtatggcagagagaggtgctcat
gtcttctcttgtggatatcaaaattctacaagattttggttcccatgtgttgattcatac
tctgagttgtgtacatggaaattagaatttacagtagatgctgcaatggtagccgtgtcc
aatggagatttggtggagacagtgtacacccacgacatgaggaagaagactttccattac
gtgcttactattcccacagcagcacccaatatctccctggccattggaccttttgaaata
cttgtagacccatatatgcatgaggttacacatttttgtttaccccagctccttccatta
ctcaaacataccacgtcataccttcatgaagtttttgaattttatgaagaaattttgact
tgtcgctatccatactcctgttttaagactgtcttcatcgatgaggcttatgttgaggtg
gctgcttatgcttctatgagtattttcagcacaaaccttctgcacagtgccatgattata
gatgagacgcccctgaccaggcggtgcctagcgcagtcgttagcgcagcagttctttgga
tgcttcatatcgagaatgtcttggtctgatgaatgggtcctgaaaggaatttcaggctat
atttatggactctggatgaaaaaaacttttggtgttaatgagtaccgccactggattaaa
gaggagctagataaaatagtggcatatgaactgaaaactgggggagttttattacatccc
atatttggtggtggaaaagaaaaggataacccctcatctcaccttcacttttcaataaag
catccgcatacactgtcctgggaatactacactatgtttcaatgtaaagctcacctcgtg
atgagactgattgaaaacagaatcagcatggaatttatgctacaagttttcaataaacta
ctaagcctggccagtactgcttcgtctcagaagttccagtcgcacatgtggagtcagatg
ctggtttccacctatgggtttttgaagtccatttccaatgtctctggcaaagacatccag
cccttaattaagcagtgggtagaccagagtggagtagtaaaattttatggaagcttcgca
tttaatagaaaacgaaatgttttagaactagaaataaaacaagattatacatctcctgga
actcagaagtacgtgggaccacttaaagtaacagtgcaagagttagacggatccttcaac
cataccttgcaaattgaagaaaacagccttaaacacgatataccctgccactctaaaagc
agaaggaataagaagaaaaaaattccactaatgaatggggaagaagttgacatggatctt
tctgcaatggacgctgattcccctttgctgtggataaggatagacccagatatgtcagtc
ctgaggaaggtggaatttgagcaggctgattttatgtggcagtatgagctgcgctatgaa
agagatgtcgttgctcaacaggaatccatcctggccttggaaaaattccccaccccagca
tcacgcctggcactcaccgatatactagaacaagagcagtgtttctaccgagtgaggatg
tcggcatgcttctgtcttgcgaagattgcaaactcaatggtgagcacatggacaggacca
ccagccatgaagtctctcttcactagaatgttttgttgtaaaacttgtccaaacattgtt
aaaacaaacaacttcatgagttttcagagttattttctacagaagaccatgccagttgcc
atggctttgttaagagatgtacataatctttgtcccaaagaagttttaacatttatttta
gacttaatcaagtacaatgacaacaggaaaaataagttttcagataactattaccgtgca
gaaatgattgatgctctggctaattctgttacacctgctgtcagtgtgaataatgaagtt
agaactttggataacttaaatcctgatgttcgactaattctggaagaaataacccggttt
ttgaatatggagaagcttctcccaagttacaggcacactatcactgtcagttgcttgaga
gccataagggtgcttcagaagaacggacatgtgccaagtgattcttctcttttcaaatcc
tatgctgagtatgggcatttcgtggacatcaggatagcggctctggaagccgttgtggat
tacactaaagtggaccggagttgtgaagaacttcagtggctacttaatatgattcagact
gaccctgttccatatgtaaggcataagattctaaacatgttgactaagaatccgccattt
acaaagaacatggagtctcccttatgcaatgaagccctagtagatcaactgtggaaacta
atgaattctggtactgcacatgactggaggttacggtgtggtgctgtggacttgtacttc
actctctttggcctcagtagaccttcctgtttacccttgccagaactcgggcttgtcctc
aatctaaaagagaaaaaagccgtcttgaatcctaccataattccagaagccggagcaggc
aaccaggaatcctcgagtaacccaggctctcatgctcagctcgctggatttcagaaccct
ttttcaagttctcaagatgaggaggaggtcgatatggatactgttcatgacagtcaggcc
ttcatttcccatcatctgaacatgcttgaaaggccatctactccagggctttctaaatat
cgcccatcaagctccaggtcttccttaatgcctcagcattcattaggctgtgacatcata
ccaaccacaaaaccccagtggactatggaactgtcccgaaagggaataggtaaggagcag
cctttggagatgagtgtgcattgcatgggagcagctccgctctcgatgtttggtaaggag
tctacgtcctctagacacagcgaccaccatcaccatcatcaccatgagcacaagaagaag
aagaagaagcacaagcacaaacataagcacaaacacaagcacgacagcaaagacaaggac
aaggagccctttgccttctccagccctgccagcggcaggtctgtgcgctccccgtcactc
tcggactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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