KEGG   Campylobacter geochelonis: CGEO_0575
Entry
CGEO_0575         CDS       T06802                                 
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cgeo  Campylobacter geochelonis
Pathway
cgeo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGEO_0575 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgeo03019]
    CGEO_0575 (pnp)
   03016 Transfer RNA biogenesis [BR:cgeo03016]
    CGEO_0575 (pnp)
Enzymes [BR:cgeo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CGEO_0575 (pnp)
Messenger RNA biogenesis [BR:cgeo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CGEO_0575 (pnp)
Transfer RNA biogenesis [BR:cgeo03016]
 Prokaryotic type
  tRNA degradation factors
   CGEO_0575 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C KH_1 S1 PNPase S1_2 S1CSD-TOTE-1 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: QKF70898
Position
606509..608701
AA seq 730 aa
MQYSIEVNNQVEIFDLDKVAKQAAGAVLMRVKNTVVLATVARDEVQVDGDFLPLTVQYVE
KAYATGRIPGGYIKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVFVLSADSEVD
LQVVALNAASVALYLSDIPVDRPVCGVRVGRINDEFVINPSNSQLKDSSLDLYVAGVKDE
LLMIEMRSISQESNEISPIATMMTPMVDPLISESINLTQSMNEFNEELMVEAIKFGADAI
LKGSNAYEEAFKAHKKAPANLEFKPEIENENIALYIDQFYKDEVKFAINQMAKSERATEL
NKIVKTILSDETAITEGWEEGVISNVLGKYKKRIVREQIVNDRVRADGRGLKEVRPISIE
TNLLPNAHGSCLFTRGQTQALVITTLGSDGDAQMSESLTEKNALTDRFMVNYNFPGFSVG
EASPLRSPGRRELGHGNLAKRALAPSIYANEPQVIRVVSEILESNGSSSMATVCGGALSL
RAAGVNTIKLVAGIAMGLIFENDKHAILSDIMGLEDHDGDMDFKVAGTIDGITALQMDIK
LGGISLEVLREALYQAKEGREHILKIMQRADEEIVINEDVLPKLELFSVEPSKIVDIIGQ
AGKTIKEIIEKFGVSIDLDRDKGEVKISGGKKKQVEAAKDYIIEITQKEPRGFRKGGSKR
EPKKNVHFEVGEEFEGEVKSMVDFGAFIHLKDGVDGLLHISKIKTPLKAGDMVKVKVSEL
KGSKISLELA
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgcagtattcaatagaagtaaacaatcaagtagaaatttttgaccttgataaggtagcc
aaacaagcagctggcgctgttttgatgagagttaaaaacacagtagttttagcaactgta
gcgcgagatgaagttcaagtagatggcgattttttgcctttaacagttcaatacgtagaa
aaagcatatgcaactggaagaattcctggtggatatattaaaagagagactaaaccaggt
gattttgaaaccctaactagccgcattatcgatagaagtttaagaccgctttttccaaaa
ggatatgcatatccaactcaaatagtcgtttttgttctttcagcagactctgaagtagat
cttcaggttgtagctttaaacgcagcaagcgtggcgctatacttaagcgatatcccagtt
gatagaccagtttgtggcgttagagtaggtaggataaatgatgagtttgttataaaccct
tcaaattctcagctaaaagatagctcacttgatttatacgtagctggtgtaaaagatgaa
cttttaatgatagagatgagatcaatctcacaagagagtaacgaaatttcgccgattgct
acgatgatgactccgatggtagatccacttatttcagagagcataaatttaactcaaagt
atgaatgaatttaacgaagagcttatggttgaagctatcaaatttggtgcagatgcgata
ctaaaaggaagcaacgcttatgaagaggcgtttaaagcgcataaaaaagcgcctgcaaat
ttagagtttaaacctgagattgaaaatgaaaatatagcactttatatcgatcaattttac
aaagatgaggttaaatttgctataaatcaaatggcaaaaagcgagcgagcaacagagctt
aataagatagttaaaaccatattaagcgatgaaacagctataacagaaggttgggaagag
ggcgttatatctaacgtcttaggcaaatacaaaaaaagaatcgttagagagcaaatcgta
aatgatagagtaagagccgatggcagaggactaaaagaggttcgccctatatcaatcgag
acgaatttacttccaaatgcgcatggaagttgcctttttactagaggtcaaactcaagcg
ttagttatcacgactttaggaagtgatggagatgctcaaatgagcgagtctttgactgag
aaaaatgcgcttactgatagatttatggtaaattataacttccctggctttagcgttggc
gaggcaagtccattaagaagcccaggcagaagagagctaggacatggaaatttagccaaa
cgcgcacttgctccaagcatttatgcaaacgagcctcaagttatcagagttgttagcgaa
attctagaatcaaacggctcaagctcgatggctacggtttgtggtggggctttatcttta
agagcggctggtgtaaatactataaaactagttgctggtatcgcgatggggttgattttt
gaaaatgataaacacgcgattttaagcgatattatggggcttgaagatcacgatggcgat
atggactttaaagttgctggaacgattgatggaattacagctttgcaaatggatataaaa
cttggtggaattagcctagaagtgctaagagaggcgctttatcaagcaaaagagggacgc
gagcatatccttaaaattatgcaaagagcagatgaagagatagttataaacgaagatgtg
cttccaaaactggagctttttagcgttgaacctagcaaaatcgttgatatcatcggacaa
gctggaaaaactataaaagagattatagagaaatttggcgtatcgattgaccttgataga
gataaaggagaggttaaaatctctggcggcaagaaaaaacaggtagaagcggcaaaagac
tatataattgaaatcacccaaaaagagccaagaggctttagaaaaggtggctcaaaacga
gaaccaaagaaaaatgttcactttgaagtaggcgaggaattcgagggtgaagttaagagt
atggttgattttggtgcgtttatacacctaaaagatggcgttgatgggcttttacatata
tctaagataaaaactccgctaaaagctggcgatatggtaaaagtaaaagttagcgaactt
aaaggctcaaaaatttcgctcgaacttgcataa

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