KEGG   Carassius gibelio (silver crucian carp): 127945827
Entry
127945827         CDS       T08819                                 
Name
(RefSeq) tubulin beta-5 chain-like
  KO
K07375  tubulin beta
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04145  Phagocytosis
cgib04517  IgSF CAM signaling
cgib04540  Gap junction
cgib04814  Motor proteins
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    127945827
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    127945827
  09144 Cellular community - eukaryotes
   04540 Gap junction
    127945827
  09142 Cell motility
   04814 Motor proteins
    127945827
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127945827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    127945827
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cgib04812]
    127945827
   04147 Exosome [BR:cgib04147]
    127945827
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     127945827
Cytoskeleton proteins [BR:cgib04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    127945827
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127945827
  Exosomal proteins of colorectal cancer cells
   127945827
  Exosomal proteins of bladder cancer cells
   127945827
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 127945827
NCBI-ProteinID: XP_052397865
Position
A24:16030230..16034921
AA seq 504 aa
MPARVIVQLICHSNLHQSCERQSESWRSCVRLSSPSVCSRARARAHSEEHLHLHTPTAMR
EIVHIQAGQCGNQIGTKFWEVISDEHGIDAAGNYVGDSALQLDRINVYYNEASSHKYVPR
AILVDLEPGTMDSVRSGAFGQLYRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRK
ECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEP
YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRF
PGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTARGSQQYRSLTVPELTQQMFDAKNMMAA
CDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPKGLK
MASTFIGNSTAIQELFKRISEQFSAMFKRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEY
QQYQEATANDGEEAFEDDEEEVNE
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgccagcacgtgtgattgtgcagctgatatgtcattcaaatctgcaccaatcgtgtgag
aggcagagtgaaagctggagatcatgtgtcagactgagctcaccctcagtctgcagcaga
gccagagccagagctcactcagaggagcatcttcatcttcacacacctacagcaatgagg
gagatcgttcacattcaagccggacagtgcggcaatcagatcggaacaaagttctgggaa
gtcatcagtgacgagcacggcatcgatgcagccggcaactacgtgggtgactctgcgctg
cagcttgacagaattaatgtatactacaacgaggcgtcctctcacaagtatgttcccaga
gccatacttgtggacctggagcctggaactatggacagtgttcgttctggggcatttgga
cagctgtatcgaccagataacttcatctttggacagacaggtgcaggaaacaactgggcc
aagggccactacacggaaggagccgagctggtggactctgtcctggatgtggtcaggaag
gagtgtgagcactgtgattgtctgcagggcttccagctcacacactccctcggcggagga
accggatcgggaatggggactcttctgatcagcaagatccgagaggagtatccagaccgc
atcatgaacaccttcagcgtcatgccttcacccaaagtgtccgatacggtggtggagccc
tacaacgccacactgtcggtgcatcagctggtggaaaacacagatgaaacgtactgcatc
gataacgaggcgctgtacgatatctgcttccgcacgctcaagcttaccacacccacgtac
ggcgatctcaatcacttagtgtcggcgactatgagtggcgtcaccacttcgctacgcttc
cccggacagctgaacgcagatctgcgcaagctagcggtcaacatggtgcctttccctcgc
cttcacttcttcatacccggcttcgcgccgttgaccgcaagaggaagtcaacagtatcgc
tcgctcaccgtgcctgaactcacacagcagatgtttgacgccaagaacatgatggccgct
tgtgacccaaggcatgggcgatacctcacggtggccactgttttccgtggccccatgtct
atgaaggaagtcgatgagcagatgttggccattcagaacaagaacagcagctatttcgta
gagtggatccccaacaacgttaaagtggcggtgtgcgatatcccacccaagggactgaag
atggcctccacttttatcggcaacagcacggccatccaggagctcttcaaacgcatttcc
gagcagttttcggcaatgttcaaacgcaaggccttcctgcattggttcactggcgaggga
atggatgagatggagttcaccgaggccgagagcaatatgaacgacctggtgtcggagtat
cagcagtaccaggaggctacggccaatgatggcgaggaagcatttgaggatgatgaggaa
gaggtgaacgagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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