KEGG   Carassius gibelio (silver crucian carp): 127965126
Entry
127965126         CDS       T08819                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127965126
Spliceosome [BR:cgib03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    127965126
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    127965126
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 DUF7026
Other DBs
NCBI-GeneID: 127965126
NCBI-ProteinID: XP_052421675
Position
B9:complement(24310630..24348994)
AA seq 1006 aa
MAAESNESEMALNMSSTSREEPPSPGEMQQRERKASTSSSEDGDSDGEDSRRVVDGQRNP
AAGRPEGSAQPEDAGSKDGSPRAGSPGVRASSRPGHNQESSGSDSDSSEDDSDDGVMHRM
KSSVTHIKRASEDESKNRQRSSSSDRDEKKSQSRSRSRSRSRSRSPQERYGRGRRSRERE
RDRGRYDDRDRYERRSSRERDWEHRRRGRSASPAKNDKSPTEEPPVKKRKEALDPILTRT
GGAYIPPAKLRMMQAQITDKSSLEYQRMSWEALKKSINGLINKVNVSNIANIIQELLQEN
IVRGRGLLARSTLQAQAASPIFTHVYAAVVAIINSKFPQIGELILKRLILNFRKGYRRND
KQQCLTASKFVGHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAISFLKDCGLKLTEVSP
RGINAIFERLRNILHESEIDKRVQYMIEVMFAIRKDGFKDHPIIPDGLDLVEEEDQFTHM
LPLEDDYNTEDILNVFKLDPNFLENEEKYKAIKREILDEGSSDSGDDAGGSGDDEDDDDD
EGEEEAAGEEQEKVTIFDQTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKE
LCNMILDCCAQQRTYEKFFGLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVS
RMFAHLLYTDSIPWSVLECVRMSEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDMTL
QSFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEVESTDSSS
SSSDSSSSDSSSDSDSSDSDSDSSSDSDSSSSSDSSSDSDSRRKKASSKKKDKNKEKKRS
SKSANQRSPLEERPSKRHENRRQDDSNEDRRGSDKHQRDSRRQGHEDESPPARQRGEPER
GRGHKEQQLAPEHEDRQPDSRKHKDDGKNSRADKDKDRRRSREKEPPRRSRDRSKSRERS
RKDTDSRGSYKNGLERVDKENRHSDRYKESRRKDERSRDSSPRRHR
NT seq 3021 nt   +upstreamnt  +downstreamnt
atggcggccgagtcaaacgagtccgaaatggcattgaatatgagttctacatccagagaa
gagcctcccagcccaggagaaatgcagcagcgggagagaaaggccagcacaagttcatct
gaggatggagacagtgatggtgaggacagcaggagggttgttgatggccaacgtaaccct
gctgcaggtagacctgagggttcagctcaacctgaggatgctggctccaaagatgggagt
ccacgggcgggcagccctggggtgagagcatcgtccaggcccgggcacaatcaagagtcc
agcggctcagacagtgacagcagtgaagacgacagtgatgacggtgttatgcacaggatg
aagagcagtgtcacgcatatcaagcgtgcctctgaagatgagagcaaaaaccgacaaaga
agctcctcatctgatagggatgaaaagaagtcacagtcaagatcccgctccagatcccgc
tctagatctcgttctcctcaagaacgttatggaagaggtcgtaggtccagggagcgcgag
cgagatcgaggccgctatgatgaccgggatcgttatgaaaggcgctccagcagagagagg
gattgggaacacaggaggaggggaaggtcagcatccccagccaaaaatgataaatctccc
actgaggagcctccagtaaagaagaggaaggaagcgctggaccccatccttacccgcact
ggtggggcctacatcccaccggccaaactgagaatgatgcaggctcagatcactgacaag
agcagtttggagtatcagaggatgagctgggaagccctgaagaagtccatcaatggtctg
atcaacaaagtaaacgtttccaacatcgccaacattattcaagagctgctgcaggagaat
atagtgaggggcaggggtcttctggccaggtcgacacttcaggctcaggctgcctctccc
atcttcacccatgtgtacgctgcagtggtagccatcatcaactccaagttccctcagatc
ggagaacttattctaaagagacttatcctcaatttccggaaaggttacaggaggaatgat
aaacaacaatgtctcacagcatccaagttcgtgggtcatctcatcaaccagaatgtggct
catgaagtcctgtgtctagagatgttaactctgctgttggaaagacccactgatgacagt
gtagaagtggccatcagctttctaaaagactgtggtctcaaactgacagaggtctcccct
cgaggcatcaacgctatctttgaacgcctgaggaacatcttgcatgaatcagagatagat
aagcgtgtacagtacatgattgaggtgatgtttgccatcaggaaggatgggtttaaggac
caccctattatcccagatgggcttgacctagtggaagaagaggaccagttcacacacatg
cttcctctggaggacgattacaacacagaggacatcttaaatgtcttcaagttggatccc
aacttcctggagaacgaggagaagtacaaagcaattaaacgggaaattcttgacgaagga
agcagtgattctggtgatgacgctggtggcagtggagatgacgaagatgatgatgatgat
gaaggtgaagaggaggcagctggagaagaacaagagaaagtcaccatcttcgaccagaca
gaggtgaacttggtagcgttccgtcgaacgatttacctcgccatccagtcaagcttggac
ttcgaagaatgtgcccacaagttgataaaaatggatttccccgagagccagacgaaagag
ctgtgcaacatgatcctggactgttgtgcccagcaaagaacatacgagaagttctttggt
ctcctagctgggaggttttgcctgctgaagaaagaatatatggagagttttgaagccatc
ttccaggagcagtatgaaaccatccaccggcttgaaaccaacaaattgcgtaacgtttct
cgaatgtttgctcatctcctctacacagactccattccatggagtgtccttgaatgcgtt
agaatgagtgaagacacaactacgtcctccagtcgaatctttgtgaagattttgttccag
gaactttgtgcttatatgggtttgccaaaactgaatgagagactgaaggacatgactctt
cagtctttcttcgagggtcttttcccacgtgacaacccaaggaacacgagatttgccatt
aatttcttcacatcaattggcctcggaggacttacggatgagttaagagaacatctaaag
aatgctcctaagatgatcatgacccagaatcaggaagtggagtcaacggattcttcctcc
tcttcctcagactcctcctcttcagattcctcatctgacagcgacagcagtgacagtgac
tcggattcgtccagcgactcagactcctcctccagcagtgacagctcctcagactcagac
tcgaggcgtaagaaggcctcgagcaagaagaaggacaagaacaaggaaaagaagaggtcc
agcaagtcagcaaaccagcgatctcctctggaggagcgtcccagcaagagacatgagaac
cggcggcaagacgacagcaacgaagaccgccgcggatccgacaagcaccagagagattct
cgccgccagggacacgaggacgaatcgccccctgctcgacagcgtggagaacctgagcgc
gggagaggacataaagagcagcaactcgctccggagcacgaagaccgacagccagattca
cgcaagcataaggacgacggcaaaaactcccgagcggacaaggacaaagatagacgcaga
agcagagagaaggagcctccgagacggagccgggacaggtcaaagtcacgagagaggagc
cgcaaagacaccgactccaggggctcgtacaagaacggcttggagagggtggataaagag
aacaggcattctgaccgatacaaagagtccaggagaaaagacgagaggagcagggatagc
tcaccgaggagacacagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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