KEGG   Carassius gibelio (silver crucian carp): 127976760
Entry
127976760         CDS       T08819                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127976760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127976760
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127976760
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 127976760
NCBI-ProteinID: XP_052437369
Position
B17:22279677..22308214
AA seq 619 aa
MSQDSQHGKWTISDSEDEDNIIPPTPQKESNKPSIKPDLERKPDTSTTFFKQEPRLSPKR
NEDTHSIKEPSAPSMGSEARKAAHVNQTLPVKYESNPSPSVKRKRETEEAGWNLSSSDDE
TPPPAPKKEPKKSDVSPKKKKTEDTRPPSPHGTGYYKEEPSDFFETNLLSMNDMYRFYLN
KVTGIPKQFNTGALHIKDILSPMFGTLKESVQFNYCFDVPWMVEQYPPEFRDKPVILVHG
EKRESKARLIEQAKPYPHIRFCQAKLDIAFGTHHTKMMLLWYEEGFRVIILTSNLIRADW
YQKTQGMWMSPLYPRLPEGSPGTAGESPTNFKSDLLEYLEAYRAPELAEWIDRIKQHDLS
ETKVYLIGSTPGRYQGPAMEKWGHLRLRKLLSEHAMPVQNEERWHVLGQFSSIGSMGLDK
TKWLAAEFQRTLTTLGKARKSLASPETQMLLIYPSVENVRTSLEGYPAGGSLPYSIQTAQ
KQLWLHSHFHGWHADVTGRSNAMPHIKTYMRVSPDYTQLAWFLVTSANLSKAAWGALEKN
NTQIMVRSYELGVLYLPSAFNMSTFPVEKNVFPASSSSKGFPVPYDLPPQHYSSKDQPWI
WNIPYTKAPDTHGNVWVPS
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgtcccaggacagtcaacacggcaaatggaccatatcagatagtgaagacgaggacaac
attattcctccaacacctcaaaaggaatcaaacaaaccaagcattaaacctgatttagaa
agaaaacctgacacgagcaccactttcttcaagcaagagcccaggctgagtccaaaacgc
aatgaggacacccattctataaaagaaccgtccgctccctccatgggatctgaagccagg
aaagccgcccatgtgaatcaaaccctccctgtaaaatatgaaagcaacccttcaccttct
gtaaagagaaagagagaaacagaagaggcaggctggaacctctcaagcagtgatgatgaa
actccaccacctgcccccaaaaaagagcccaagaagtctgatgtaagtcctaagaagaag
aagactgaagacacacgtcctccgagtccacacggcactggttattataaagaagagcca
tctgatttctttgagaccaatttattgtctatgaacgacatgtatcgtttttatttaaac
aaagtcactgggatacctaaacagttcaacactggagcgctgcatatcaaagacatactt
tctccaatgtttggaacgctgaaagagtctgtacagtttaattactgctttgatgttcca
tggatggtggagcagtatccacctgaatttagggacaagccggtcatactcgttcatgga
gaaaaaagagagtccaaggctcggttaatcgagcaagccaaaccatatccacatattcgt
ttctgccaggccaaactggatattgcatttggcacacatcatacgaaaatgatgctgctt
tggtacgaggagggtttcagagtcatcattcttacctcaaacctcatccgagccgattgg
taccagaagacacaggggatgtggatgagtcctctgtaccccaggttaccggagggaagt
ccaggaacagcgggggagtctccaaccaacttcaaaagcgacctgctggaatacctggaa
gcataccgggctccagagcttgctgagtggattgaccgcatcaaacagcatgatctgtca
gaaacgaaggtatatctcattggttcaactccaggaagatatcaaggacctgccatggag
aagtggggccatctacgattaagaaaattgctcagcgagcatgcgatgcccgtgcaaaat
gaagagcgatggcacgtgctcggccagttctccagtattggctccatgggacttgataaa
actaaatggttggcagctgagttccagcgcactctgaccacactggggaaggcaaggaaa
tcattagccagtccagaaacacagatgctcctgatttacccatctgtggaaaatgtcaga
accagtttggagggctatccagccgggggatctttaccctacagtatacagacggctcaa
aaacaactctggcttcattctcacttccatggctggcatgccgatgttactggcaggagc
aatgcgatgcctcacattaaaacctacatgagggtttcaccggactacacacaactggcc
tggtttcttgtcacaagtgccaatttatcaaaagctgcctggggcgccctggagaagaac
aacactcagattatggttcgttcctatgaactgggagttctctacctgccttcagccttt
aatatgagcacatttcctgtggagaagaatgtgtttccggcctctagctcctccaaaggc
ttcccggtgccttatgacctcccacctcagcattactcaagcaaagatcaaccgtggatc
tggaatattccttacactaaagccccagacactcatggaaatgtatgggttccttcttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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