KEGG T07513: 115026774

Cottoperca gobio: 115026774

Entry

115026774         CDS       T07513

Symbol

cwc22

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

cgob Cottoperca gobio

Brite

KEGG Orthology (KO) [BR:cgob00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgob03041]
    115026774 (cwc22)
Spliceosome [BR:cgob03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    115026774 (cwc22)
Complex C
   U4/U6.U5 tri-SnRNP related factors
    115026774 (cwc22)

SSDB

Motif

Pfam:

MA3 CIS_TMP

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

21:complement(18836285..18849372)

AA seq 1037 aa
MDSPGRSLSPIPVPKEQSGPSEDESSPAAEKPQKAGSAERSPKEKSPQASPAGRSPSGSP
ASGSAASSSSDDSTSSDDEDEHHGALRKLRSSVAQIKRSRSKSRSRERDRSISRERDRSR
SGERDRSRSISRDRSRSRGRDRSRERDRDRGRYDRGRYTRDRYDDRYDDRRDDRDGRFDR
RNNRDAEWDQRRRGRSGSPPTDREPMASEEPPVKKKKEEIDPILTRTGGAYIPPAKLRMM
QQQITDKTSLAYQRMSWEALKKSINGLINKVNVSNIVFIIQELLQENIVRGRGVLSRSVL
QAQAASPIFTHVYSAVVAIINSKFPQIGELILKRLILSFRRSYRRNLKQQCLTASKFVAH
LINQNVAHEVLCLEMLTLLLERPTDDSVEVSIAFLKECGLKLTEVSPRGINAIFERLRNV
LHESAIDKRVQYMIEVMFAIRKDGFKDHPVIPEGLDLVDEGDQFTHMLPLDDEYNIEDVL
NVFKLDPDFLDNEEKYKTIKREILDEGSSDSGEEGDDSDEDEDEEEENAEAAEDEKITIY
DQTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPDSQTKELCNMILDCCAQQRTYEK
FFGLLAGRFCLLKKEYMESFEGIFAEQYDTIHRLETNKLRNVARLFAHLLYTDSVPWSVL
ECVRMSEETTTSSSRIFVKILFQELCAYMGLPRLNQRLKDPTLQPFFEGLFPRDNPRNTR
FAINFFTSIGLGGLTDELREHLKNAPKIIMTQNQEVESSDSSSSSSSSSSSSDSSSSDSS
SDSDSSSSSSSDSDSKHRKKKRKEQSVEKKKKMKKGEDKKKKQKKKKEKQSDKKRAVRKN
DDEDSDDEKQAMKHRKGHPREVEGRPREVEGRPREAEGRPREAEGRPREAEGRPREAEGR
PREAEGRPREAEGRPREAEGRAREAEERESAREADERVRAREGARRSRRDDREEEEERQQ
EGERRKMDTQGRQRDGERERDSGRERDRDSGRERDRERGRERETEEKRESEREREKPRDR
ERNKENRDRNREERRRK

NT seq 3114 nt +upstreamnt +downstreamnt
atggactctccaggcagaagtctcagtcccattcctgtgccgaaagaacaaagtggacca
tcagaagacgagtccagtcctgcagcagagaagccccaaaaggccggctcggctgagaga
agccccaaagagaagtcccctcaggccagtcctgcaggccgttccccctccggtagccct
gcctctgggagtgctgcctccagcagctcagacgacagcactagcagtgatgatgaggac
gaacatcatggagcactgaggaaactcaggagcagtgtggctcagatcaaaagatcaaga
tccaagtccaggtccagagaacgagaccgatctatatccagagagcgagaccgatccaga
tctggcgagcgagacagatccagatccatatccagagacagatcaagatccagaggacgc
gacaggtccagagagagagacagagaccgggggcgctacgacagaggacgctatactcgg
gatcgctatgacgatcgctatgacgatcgtcgtgacgacagggatgggcgttttgaccga
cgaaacaaccgggatgcagagtgggatcagagaaggcgagggcgctccggctcccctcca
acagacagggagccaatggcgtctgaggagccgccagtcaagaagaagaaagaggagatt
gacccgatcctgacgaggacgggtggagcttacatcccccccgccaagctgcgcatgatg
cagcagcaaatcactgacaagaccagcctggcctatcagaggatgagctgggaggccctg
aagaagtccatcaacggtctgatcaacaaagtcaacgtgtcgaacatcgtcttcatcatc
caggagctgctgcaggagaacatcgtcagggggaggggtgtgctgtctcgctcggtgctt
caggctcaggcggcatctccgatttttactcacgtttactcggctgttgtcgccatcatc
aactcaaagttccctcagattggagagctgatcctcaaacgcctcatcctgtccttcagg
aggagctaccgccgcaacctcaagcaacagtgcctgacggcctcaaagtttgtggctcat
ctcatcaaccagaacgtggctcatgaggttttgtgtctggagatgctcactctgctgctg
gagcgtccgactgacgacagcgtggaggtctccatcgccttcctgaaggaatgtggactt
aaactgaccgaggtgtccccgcgaggaataaacgccatatttgagcgtctcaggaacgtc
ctccacgagtcggccattgataagagggtccagtacatgatcgaggtgatgtttgccatc
aggaaggacggtttcaaagatcaccctgtgatcccagagggcctggacctagtggatgag
ggagaccagttcacccacatgctgccactggacgacgagtacaacatcgaggacgtcctc
aatgtgtttaagttggacccagacttcttggacaacgaggagaaatacaaaaccatcaaa
agagagatcctggacgagggcagcagcgactcaggggaggagggtgacgacagcgacgaa
gatgaagacgaggaagaggaaaacgcggaggcagcagaagatgagaagatcaccatctat
gatcagacagaagtcaatctggtggctttcagaagaaccatctacctcgctatccagtcc
agtttggactttgaggagtgcgctcacaaactgatcaagatggactttcctgacagccag
acgaaagagctgtgtaacatgatcctggactgctgcgctcaacagagaacctacgagaag
ttctttggtctgctggccgggagattctgtctgctgaagaaagagtacatggaaagtttt
gaggggatttttgcggagcagtacgacacgattcaccgactggagaccaacaagctgagg
aacgtggctcgactgttcgctcacctgctctacacagactctgtgccctggagtgtgctg
gagtgtgtcagaatgagtgaggagaccacgacgtcgtccagcaggatcttcgtgaagatc
cttttccaggagctgtgtgcctacatgggcctccccagactcaaccagaggctcaaagac
ccgactctgcagccgttctttgagggtcttttcccccgtgataatcccagaaacactcgc
ttcgccatcaacttcttcacctctattggattgggaggactgacggacgagttgagggaa
catttgaagaacgctcccaagattatcatgactcagaaccaggaagtggaatcctctgac
tcctcctcatcttcatcctcctcttcctcctcgtctgattcctcctcgtcagactcgtcc
agcgattcagactcatccagcagcagcagctcagactcagacagcaaacacagaaagaag
aagagaaaagaacaaagcgtggagaaaaagaagaagatgaagaaaggtgaggacaagaag
aagaagcagaagaagaagaaggaaaagcagtctgacaagaagcgagctgtacgcaagaat
gacgatgaggacagtgatgacgagaagcaggcgatgaagcacaggaaaggccatccacgt
gaggtcgaggggcgtccgcgtgaggtcgaggggcgtccgcgtgaggccgaggggcgtccg
cgtgaggccgaggggcgtccgcgtgaggcggaggggcgtccgcgtgaggcggaggggcgt
ccgcgtgaggcggaggggcgtccgcgtgaggcggaggggcgtccgcgtgaggcggagggg
cgtgcgcgtgaggcggaggagcgtgagagtgcgcgtgaggcagatgaacgtgtgcgtgca
cgtgagggtgcccgccggagcagacgagacgacagagaagaagaagaggagcggcagcag
gagggtgagagaagaaaaatggacactcaaggccggcaaagagacggggagagagagaga
gacagcgggagggaaagggacagagacagcgggagggaaagggacagagagcgagggagg
gagagagagactgaggagaagcgagagagtgagagagagcgagagaagccgagggataga
gagaggaataaagagaacagagacaggaacagagaggagaggaggaggaagtaa

All links

Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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