KEGG   Clupea harengus (Atlantic herring): 105906532
Entry
105906532         CDS       T09045                                 
Name
(RefSeq) tubulin beta-3 chain
  KO
K07375  tubulin beta
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04145  Phagocytosis
char04517  IgSF CAM signaling
char04540  Gap junction
char04814  Motor proteins
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    105906532
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    105906532
  09144 Cellular community - eukaryotes
   04540 Gap junction
    105906532
  09142 Cell motility
   04814 Motor proteins
    105906532
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105906532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:char03036]
    105906532
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105906532
   04147 Exosome [BR:char04147]
    105906532
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     105906532
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    105906532
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105906532
  Exosomal proteins of colorectal cancer cells
   105906532
  Exosomal proteins of bladder cancer cells
   105906532
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 105906532
NCBI-ProteinID: XP_012690153
UniProt: A0A6P3W564
Position
6:20141268..20146757
AA seq 448 aa
MREIVHLQAGQCGNQIGTKFWEVISDEHGIDPTGNYVGDSDLQLERINVYYNEAHTNKYV
PRAIMVDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDMV
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLPTPTYGDLNHLVSCTMSGVTTSF
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGNVQYSALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATIFRGRMSMKEVDEQMMAIQRKNSSYFVEWIPNNVKVAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGELYEDEEQESEIQD
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcgagaaatcgtccaccttcaagctggccagtgcggcaatcaaattggaaccaagttc
tgggaggtgatcagtgatgagcatggcatcgaccctactgggaactatgtgggagattca
gatttgcagctggagagaatcaacgtctactataacgaggctcataccaacaagtatgtt
ccgagagctatcatggtggatttggaacctggtaccatggacagtgtccgcagtggcccc
tttggacaacttttcagacctgataacttcatttttggtcaaagtggggctgggaacaat
tgggccaaaggtcactacacagagggagctgagctggtggactcagtactggacatggtg
aggaaggagtgtgagaactgcgactgcctgcagggcttccagctcacccactctttgggc
gggggaacaggctcgggcatgggcacactgctcatcagtaaggtccgggaggagtaccct
gaccgcatcatgaacaccttcagtgtggtgccctcgcccaaagtatcggacactgttgtg
gaaccctacaatgctacactctccattcaccagctggtggagaacacggatgagacctac
tgcatcgacaacgaggcgctgtatgatatctgcttccgcacacttaagctgcccacgccc
acctatggtgacctcaaccaccttgtctcctgcaccatgagtggagtcaccacctccttt
cgcttccccggccagctcaatgccgatcttcgtaaactggcagttaacatggtaccattc
ccccgcctgcatttctttatgccaggctttgcccctctgacagctagggggaacgtgcag
tacagtgctcttactgtgcccgagctcacccagcagatgtttgatgccaaaaacatgatg
gcagcctgtgacccacgccatggccgctaccttaccgtggcaactattttccgcggtcgc
atgtcaatgaaggaggtggacgagcagatgatggctatccagagaaagaacagcagctac
tttgtggaatggatcccaaacaatgtgaaagtggctgtgtgtgacatcccgccgagaggc
ctcaagatgtcgtctacattcatcggcaacagcacagccatccaggagctcttcaaacgc
atctcggagcagttctctgccatgttccgccgcaaggccttcctgcactggtacacgggc
gagggcatggatgagatggagtttacagaagccgagagcaacatgaatgacctggtgtcc
gagtaccagcagtaccaggacgccactgcagatgaggagggcgagctgtatgaagacgag
gagcaagagtcagagatccaggattaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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