KEGG   Clupea harengus (Atlantic herring): 122132011
Entry
122132011         CDS       T09045                                 
Name
(RefSeq) tubulin beta chain-like
  KO
K07375  tubulin beta
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04145  Phagocytosis
char04517  IgSF CAM signaling
char04540  Gap junction
char04814  Motor proteins
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    122132011
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    122132011
  09144 Cellular community - eukaryotes
   04540 Gap junction
    122132011
  09142 Cell motility
   04814 Motor proteins
    122132011
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122132011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:char03036]
    122132011
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    122132011
   04147 Exosome [BR:char04147]
    122132011
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     122132011
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    122132011
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122132011
  Exosomal proteins of colorectal cancer cells
   122132011
  Exosomal proteins of bladder cancer cells
   122132011
SSDB
Motif
Pfam: Tubulin_C Tubulin Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 122132011
NCBI-ProteinID: XP_042562693
UniProt: A0A8M1KK13
Position
Unknown
AA seq 372 aa
MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQG
FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL
VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
LAVNMVPFPRLHFFMPGFAPLTSRGCQQYRALSVPELTQQMFDSKNMMAACDPRHGRYLT
VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST
AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE
GEFEEEGEESIA
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggattctgtccgatccggtccctttggccagatcttcagacccgacaacttcgtcttt
ggtcagagcggtgctggaaacaactgggccaagggccattacactgagggggctgagctg
gtcgactctgtcctggatgtggtgaggaaggaggccgagaactgtgactgcctgcagggc
ttccagctcacccactccctgggcggtggcaccggctcaggcatgggcaccctgctcatc
agcaagatccgcgaagagtaccccgaccgcatcatgaacaccttcagcgttgtgccatcc
ccaaaggtgtccgacaccgtggtggagccctacaacgctacactctctgtgcaccagctg
gtggagaacactgacgagaccttctgcatcgacaacgaggcgctctacgacatctgcttc
cgcaccctcaaactcactacgcccacatatggcgacctcaaccacctggtgtccgccacc
atgagcggagtcacaacctgcctgcgcttccccggtcagctcaatgccgacctccgcaaa
ctggccgtcaacatggtgcccttcccccgtctgcacttcttcatgccagggttcgccccc
ctcaccagccgtggctgccagcagtaccgcgccctctccgtacctgagcttacccagcag
atgttcgattccaaaaacatgatggccgcctgcgacccacgccacggccgctacctgact
gtggccgccatcttccgcggacgcatgtccatgaaggaggtggacgaacagatgctcaac
atccagaacaagaacagcagctacttcgtggagtggatccccaacaatgtgaagaccgcc
gtctgcgacattcccccgcgcgggctcaaaatgtcaggcacattcatcggcaacagcact
gccatccaggagctgttcaagcgaatctccgagcagtttaccgccatgttccgccgcaag
gccttcctccactggtacaccggcgagggcatggatgagatggagttcactgaggctgag
agcaacatgaacgacctggtgtccgagtaccagcagtaccaggacgccaccgccgaggag
ggcgagtttgaggaggagggcgaagagagcatcgcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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